tested new scripts to update shebang, all files got same shebang (and for python files encoding)

code/DAMASK_run.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import numpy,os,damask,string,sys,subprocess,re
 from optparse import OptionParser, Option

examples/SpectralMethod/example_postprocess.py

@@ -1,5 +1,6 @@
 #!/usr/bin/env python
-# -*- coding: utf-8 -*-
+# -*- coding: UTF-8 no BOM -*-
+
 import os
 import glob
 from subprocess import call

examples/SpectralMethod/example_run.py

@@ -1,5 +1,5 @@
 #!/usr/bin/env python
-# -*- coding: utf-8 -*-
+# -*- coding: UTF-8 no BOM -*-
 
 from subprocess import call
 call('DAMASK_spectral -l tensionX.load -g 20grains16x16x16.geom', shell=True)

installation/mods_MarcMentat/apply_DAMASK_modifications.sh

@@ -1,4 +1,4 @@
-#!/bin/bash
+#!/usr/bin/env bash
 
 DEFAULT_VERSION='2013.1'
 

installation/symlink_Code.py

@@ -1,4 +1,6 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
+
 import os
 import damask
 

installation/symlink_Processing.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 # Makes postprocessing routines acessible from everywhere.
 import os

lib/damask/__init__.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 import sys, os
 

lib/damask/asciitable.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 class ASCIItable():

lib/damask/colormaps.py

@@ -1,5 +1,4 @@
-#!/usr/bin/env python
-
+# -*- coding: UTF-8 no BOM -*-
 
 ### --- COLOR CLASS --------------------------------------------------
 

lib/damask/config/__init__.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 from .material import Material

lib/damask/config/material.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 import re
 

lib/damask/config/material_2012-09-07.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 import re
 

lib/damask/environment.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 import os,sys,string,re,subprocess,shlex

lib/damask/geometry/__init__.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 from .geometry import Geometry   # only one class

lib/damask/geometry/geometry.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 import damask.geometry

lib/damask/geometry/marc.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 from .geometry import Geometry

lib/damask/geometry/spectral.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 from .geometry import Geometry

lib/damask/orientation.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 import numpy,math,random
 
 # ******************************************************************************************

lib/damask/result.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 import numpy as np

lib/damask/result/marc2vtk.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 # This tool converts a msc.marc result file into the vtk format that 
 # can be viewed by Paraview software (Kitware), or MayaVi (needs xml-vtk, or ...

lib/damask/solver/__init__.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 from .solver   import Solver     # only one class

lib/damask/solver/marc.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 from .solver import Solver

lib/damask/solver/solver.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 import damask.solver

lib/damask/solver/spectral.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 from .solver import Solver

lib/damask/test/__init__.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 from .test import Test      

lib/damask/test/test.py

@@ -1,4 +1,5 @@
-#!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
+
 # $Id$
 
 import os, sys, shlex, inspect

lib/damask/util.py

@@ -1,3 +1,5 @@
+# -*- coding: UTF-8 no BOM -*-
+
 # damask utility functions
 import math 
 try:

processing/misc/gwyddion_filter.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,re,numpy,scipy.ndimage,scipy.signal,vtk
 import damask

processing/misc/vtk_fromGwyddion.py

@@ -1,5 +1,5 @@
 #!/usr/bin/env python
-# -*- coding: utf-8 -*-
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,re,numpy,scipy.ndimage,scipy.signal,vtk
 import damask

processing/post/addCalculation.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,damask,numpy
 from optparse import OptionParser, Option

processing/post/addCauchy.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,numpy,string,damask
 from collections import defaultdict

processing/post/addCauchyX.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,h5py
 import numpy as np

processing/post/addCompatibilityMismatch.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,numpy,damask
 from optparse import OptionParser, Option

processing/post/addCurl.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,numpy,damask
 from optparse import OptionParser, Option

processing/post/addDeformedConfiguration.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,numpy,damask
 from optparse import OptionParser, Option

processing/post/addDeterminant.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,damask
 from optparse import OptionParser, Option

processing/post/addDeviator.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,damask
 from optparse import OptionParser, Option

processing/post/addDivergence.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,numpy,damask
 from optparse import OptionParser, Option

processing/post/addEhkl.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,numpy,string,damask
 from optparse import OptionParser, Option

processing/post/addEuclideanDistance.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,numpy,string,damask
 from scipy import ndimage

processing/post/addIPFcolor.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,re,math,numpy
 import damask

processing/post/addMises.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,numpy,string,damask
 from optparse import OptionParser, Option

processing/post/addNorm.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,damask
 from optparse import OptionParser, Option

processing/post/addOrientations.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,itertools,re,math,numpy
 import damask

processing/post/addPK2.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,numpy,string,damask
 from optparse import OptionParser, Option

processing/post/addSchmidfactors.py

@@ -1,4 +1,5 @@
-#!/usr/bin/python
+#!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math
 from optparse import OptionParser

processing/post/addSpectralDecomposition.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,numpy,string,damask
 from optparse import OptionParser, Option

processing/post/addStrainTensors.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,numpy,string,damask
 from optparse import OptionParser, Option

processing/post/averageDown.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,numpy,damask,time
 from optparse import OptionParser, Option

processing/post/binXY.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,numpy
 from optparse import OptionParser, Option

processing/post/blowUp.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,numpy,damask,time
 from optparse import OptionParser, Option

processing/post/deleteColumn.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,damask
 from optparse import OptionParser, Option

processing/post/deleteInfo.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,damask
 from optparse import OptionParser, Option

processing/post/filterTable.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,fnmatch,math,string,damask
 from optparse import OptionParser, Option

processing/post/marc_deformedGeometry.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os, sys, math, string, numpy, shutil
 import damask

processing/post/marc_extractData.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os, sys, math, string, re, time
 import damask

processing/post/mentat_colorMap.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import sys, string
 import damask

processing/post/nodesFromCentroids.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,numpy,damask
 from optparse import OptionParser, Option

processing/post/perceptualUniformColorMap.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import math, string, sys, os
 from damask import Color,Colormap

processing/post/permuteData.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,numpy,string
 import damask

processing/post/postResults.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import pdb, os, sys, gc, math, re, threading, time, struct, string
 import damask

processing/post/showTable.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,damask
 from optparse import OptionParser

processing/post/sortTable.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,string,numpy,damask
 from optparse import OptionParser, Option

processing/post/stddevDown.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,numpy,damask,time
 from optparse import OptionParser, Option

processing/post/tagLabel.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,re,sys,math,string,damask
 from optparse import OptionParser, Option

processing/post/vtk2ang.py

@@ -1,6 +1,6 @@
 #!/usr/bin/env python
-# -*- coding: utf-8 -*-
-#
+# -*- coding: UTF-8 no BOM -*-
+
  
 import os,numpy,string,math,sys
 from optparse import OptionParser, Option

processing/post/vtk_addData.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os, sys, string, glob, re
 import damask

processing/post/vtk_addPointcloudData.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,re,numpy,vtk
 import damask

processing/post/vtk_addVoxelcloudData.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,re,numpy,vtk
 import damask

processing/post/vtk_pointcloud.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,re,numpy,vtk
 import damask

processing/post/vtk_scalars2vectors.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os, sys, string, re, shutil
 from optparse import OptionParser

processing/post/vtk_voxelcloud.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,re,numpy,vtk
 import damask

processing/pre/geom_addPrimitive.py

@@ -1,5 +1,6 @@
 #!/usr/bin/env python
 # -*- coding: UTF-8 no BOM -*-
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,re,math,numpy
 import damask

processing/pre/geom_fromVoronoiTessellation.py

@@ -1,5 +1,4 @@
 #!/usr/bin/env python
-# -*- coding: utf-8 -*-
 
 import os,sys,math,string,re,numpy
 import damask 

processing/pre/mentat_pbcOnBoxMesh.py

@@ -1,5 +1,5 @@
 #!/usr/bin/env python
-# -*- coding: UTF-8 no BOM -*
+# -*- coding: UTF-8 no BOM -*-
 
 import sys,os,pwd,math,re,string,numpy, damask
 from optparse import OptionParser

processing/pre/seeds_fromGeom.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python
+# -*- coding: UTF-8 no BOM -*-
 
 import os,sys,string,numpy,damask
 from optparse import OptionParser, Option