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need to write out these tensors for restart

This commit is contained in:
Martin Diehl 2019-03-24 09:51:47 +01:00
parent 006450bbdd
commit 2e164a1ddd
2 changed files with 27 additions and 24 deletions
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18
src/grid_mech_spectral_basic.f90
View File

@ -161,8 +161,12 @@ subroutine grid_mech_spectral_basic_init
call DMDAVecGetArrayF90(da,solution_vec,F,ierr); CHKERRQ(ierr) ! places pointer on PETSc data
restart: if (restartInc > 0) then
write(6,'(/,a,'//IO_intOut(restartInc)//',a)') 'reading values of increment ', restartInc, ' from file'
write(6,'(/,a,'//IO_intOut(restartInc)//',a)') ' reading values of increment ', restartInc, ' from file'
fileUnit = IO_open_jobFile_binary('F_aim')
read(fileUnit) F_aim; close(fileUnit)
fileUnit = IO_open_jobFile_binary('F_aim_lastInc')
read(fileUnit) F_aim_lastInc; close(fileUnit)
fileUnit = IO_open_jobFile_binary('F_aimDot')
read(fileUnit) F_aimDot; close(fileUnit)
@ -173,12 +177,6 @@ subroutine grid_mech_spectral_basic_init
fileUnit = IO_open_jobFile_binary('F_lastInc'//trim(rankStr))
read(fileUnit) F_lastInc; close (fileUnit)
F_aim = reshape(sum(sum(sum(F,dim=4),dim=3),dim=2) * wgt, [3,3]) ! average of F
call MPI_Allreduce(MPI_IN_PLACE,F_aim,9,MPI_DOUBLE,MPI_SUM,PETSC_COMM_WORLD,ierr)
if(ierr /=0) call IO_error(894, ext_msg='F_aim')
F_aim_lastInc = sum(sum(sum(F_lastInc,dim=5),dim=4),dim=3) * wgt ! average of F_lastInc
call MPI_Allreduce(MPI_IN_PLACE,F_aim_lastInc,9,MPI_DOUBLE,MPI_SUM,PETSC_COMM_WORLD,ierr)
if(ierr /=0) call IO_error(894, ext_msg='F_aim_lastInc')
elseif (restartInc == 0) then restart
F_lastInc = spread(spread(spread(math_I3,3,grid(1)),4,grid(2)),5,grid3) ! initialize to identity
F = reshape(F_lastInc,[9,grid(1),grid(2),grid3])
@ -335,6 +333,10 @@ subroutine grid_mech_spectral_basic_forward(guess,timeinc,timeinc_old,loadCaseTi
write(fileUnit) C_volAvg; close(fileUnit)
fileUnit = IO_open_jobFile_binary('C_volAvgLastInv','w')
write(fileUnit) C_volAvgLastInc; close(fileUnit)
fileUnit = IO_open_jobFile_binary('F_aim','w')
write(fileUnit) F_aim; close(fileUnit)
fileUnit = IO_open_jobFile_binary('F_aim_lastInc','w')
write(fileUnit) F_aim_lastInc; close(fileUnit)
fileUnit = IO_open_jobFile_binary('F_aimDot','w')
write(fileUnit) F_aimDot; close(fileUnit)
endif
@ -369,7 +371,7 @@ subroutine grid_mech_spectral_basic_forward(guess,timeinc,timeinc_old,loadCaseTi
endif
Fdot = Utilities_calculateRate(guess, &
Fdot = utilities_calculateRate(guess, &
F_lastInc,reshape(F,[3,3,grid(1),grid(2),grid3]),timeinc_old, &
math_rotate_backward33(F_aimDot,rotation_BC))
F_lastInc = reshape(F, [3,3,grid(1),grid(2),grid3]) ! winding F forward

29
src/grid_mech_spectral_polarisation.f90
View File

@ -170,8 +170,12 @@ subroutine grid_mech_spectral_polarisation_init
F_tau => FandF_tau( 9:17,:,:,:)
restart: if (restartInc > 0) then
write(6,'(/,a,'//IO_intOut(restartInc)//',a)') 'reading values of increment ', restartInc, ' from file'
write(6,'(/,a,'//IO_intOut(restartInc)//',a)') ' reading values of increment ', restartInc, ' from file'
fileUnit = IO_open_jobFile_binary('F_aim')
read(fileUnit) F_aim; close(fileUnit)
fileUnit = IO_open_jobFile_binary('F_aim_lastInc')
read(fileUnit) F_aim_lastInc; close(fileUnit)
fileUnit = IO_open_jobFile_binary('F_aimDot')
read(fileUnit) F_aimDot; close(fileUnit)
@ -186,12 +190,6 @@ subroutine grid_mech_spectral_polarisation_init
fileUnit = IO_open_jobFile_binary('F_tau_lastInc'//trim(rankStr))
read(fileUnit) F_tau_lastInc; close (fileUnit)
F_aim = reshape(sum(sum(sum(F,dim=4),dim=3),dim=2) * wgt, [3,3]) ! average of F
call MPI_Allreduce(MPI_IN_PLACE,F_aim,9,MPI_DOUBLE,MPI_SUM,PETSC_COMM_WORLD,ierr)
if(ierr /=0) call IO_error(894, ext_msg='F_aim')
F_aim_lastInc = sum(sum(sum(F_lastInc,dim=5),dim=4),dim=3) * wgt ! average of F_lastInc
call MPI_Allreduce(MPI_IN_PLACE,F_aim_lastInc,9,MPI_DOUBLE,MPI_SUM,PETSC_COMM_WORLD,ierr)
if(ierr /=0) call IO_error(894, ext_msg='F_aim_lastInc')
elseif (restartInc == 0) then restart
F_lastInc = spread(spread(spread(math_I3,3,grid(1)),4,grid(2)),5,grid3) ! initialize to identity
F = reshape(F_lastInc,[9,grid(1),grid(2),grid3])
@ -208,7 +206,7 @@ subroutine grid_mech_spectral_polarisation_init
call DMDAVecRestoreArrayF90(da,solution_vec,FandF_tau,ierr); CHKERRQ(ierr) ! deassociate pointer
restartRead: if (restartInc > 0) then
write(6,'(/,a,'//IO_intOut(restartInc)//',a)') 'reading more values of increment ', restartInc, ' from file'
write(6,'(/,a,'//IO_intOut(restartInc)//',a)') ' reading more values of increment ', restartInc, ' from file'
fileUnit = IO_open_jobFile_binary('C_volAvg')
read(fileUnit) C_volAvg; close(fileUnit)
fileUnit = IO_open_jobFile_binary('C_volAvgLastInv')
@ -265,7 +263,7 @@ function grid_mech_spectral_polarisation_solution(incInfoIn,timeinc,timeinc_old,
! update stiffness (and gamma operator)
S = Utilities_maskedCompliance(rotation_BC,stress_BC%maskLogical,C_volAvg)
if (update_gamma) then
call Utilities_updateGamma(C_minMaxAvg,restartWrite)
call utilities_updateGamma(C_minMaxAvg,restartWrite)
C_scale = C_minMaxAvg
S_scale = math_invSym3333(C_minMaxAvg)
endif
@ -363,6 +361,10 @@ subroutine grid_mech_spectral_polarisation_forward(guess,timeinc,timeinc_old,loa
write(fileUnit) C_volAvg; close(fileUnit)
fileUnit = IO_open_jobFile_binary('C_volAvgLastInv','w')
write(fileUnit) C_volAvgLastInc; close(fileUnit)
fileUnit = IO_open_jobFile_binary('F_aim','w')
write(fileUnit) F_aim; close(fileUnit)
fileUnit = IO_open_jobFile_binary('F_aim_lastInc','w')
write(fileUnit) F_aim_lastInc; close(fileUnit)
fileUnit = IO_open_jobFile_binary('F_aimDot','w')
write(fileUnit) F_aimDot; close(fileUnit)
endif
@ -372,7 +374,6 @@ subroutine grid_mech_spectral_polarisation_forward(guess,timeinc,timeinc_old,loa
write(fileUnit) F; close (fileUnit)
fileUnit = IO_open_jobFile_binary('F_lastInc'//trim(rankStr),'w')
write(fileUnit) F_lastInc; close (fileUnit)
fileUnit = IO_open_jobFile_binary('F_tau'//trim(rankStr),'w')
write(fileUnit) F_tau; close (fileUnit)
fileUnit = IO_open_jobFile_binary('F_tau_lastInc'//trim(rankStr),'w')
@ -402,10 +403,10 @@ subroutine grid_mech_spectral_polarisation_forward(guess,timeinc,timeinc_old,loa
endif
Fdot = Utilities_calculateRate(guess, &
Fdot = utilities_calculateRate(guess, &
F_lastInc,reshape(F,[3,3,grid(1),grid(2),grid3]),timeinc_old, &
math_rotate_backward33(F_aimDot,rotation_BC))
F_tauDot = Utilities_calculateRate(guess, &
F_tauDot = utilities_calculateRate(guess, &
F_tau_lastInc,reshape(F_tau,[3,3,grid(1),grid(2),grid3]), timeinc_old, &
math_rotate_backward33(F_aimDot,rotation_BC))
F_lastInc = reshape(F, [3,3,grid(1),grid(2),grid3]) ! winding F forward
@ -416,7 +417,7 @@ subroutine grid_mech_spectral_polarisation_forward(guess,timeinc,timeinc_old,loa
!--------------------------------------------------------------------------------------------------
! update average and local deformation gradients
F_aim = F_aim_lastInc + F_aimDot * timeinc
F = reshape(Utilities_forwardField(timeinc,F_lastInc,Fdot, & ! estimate of F at end of time+timeinc that matches rotated F_aim on average
F = reshape(utilities_forwardField(timeinc,F_lastInc,Fdot, & ! estimate of F at end of time+timeinc that matches rotated F_aim on average
math_rotate_backward33(F_aim,rotation_BC)),&
[9,grid(1),grid(2),grid3])
if (guess) then
@ -489,7 +490,7 @@ subroutine converged(snes_local,PETScIter,xnorm,snorm,fnorm,reason,dummy,ierr)
!--------------------------------------------------------------------------------------------------
! report
write(6,'(1/,a)') ' ... reporting .............................................................'
write(6,'(/,a,f12.2,a,es8.2,a,es9.2,a)') ' error divergence = ', &
write(6,'(1/,a,f12.2,a,es8.2,a,es9.2,a)') ' error divergence = ', &
err_div/divTol, ' (',err_div, ' / m, tol = ',divTol,')'
write(6, '(a,f12.2,a,es8.2,a,es9.2,a)') ' error curl = ', &
err_curl/curlTol,' (',err_curl,' -, tol = ',curlTol,')'