avoid checking of unitialized variables
This commit is contained in:
Martin Diehl
parent
bc4b79a3a2
commit
280a11c4bc
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@ -20,21 +20,21 @@ module HDF5_utilities
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!> @details for parallel IO, all dimension except for the last need to match
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!--------------------------------------------------------------------------------------------------
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interface HDF5_read
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module procedure HDF5_read_pReal1
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module procedure HDF5_read_pReal2
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module procedure HDF5_read_pReal3
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module procedure HDF5_read_pReal4
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module procedure HDF5_read_pReal5
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module procedure HDF5_read_pReal6
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module procedure HDF5_read_pReal7
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module procedure HDF5_read_real1
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module procedure HDF5_read_real2
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module procedure HDF5_read_real3
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module procedure HDF5_read_real4
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module procedure HDF5_read_real5
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module procedure HDF5_read_real6
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module procedure HDF5_read_real7
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module procedure HDF5_read_pInt1
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module procedure HDF5_read_pInt2
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module procedure HDF5_read_pInt3
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module procedure HDF5_read_pInt4
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module procedure HDF5_read_pInt5
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module procedure HDF5_read_pInt6
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module procedure HDF5_read_pInt7
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module procedure HDF5_read_int1
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module procedure HDF5_read_int2
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module procedure HDF5_read_int3
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module procedure HDF5_read_int4
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module procedure HDF5_read_int5
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module procedure HDF5_read_int6
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module procedure HDF5_read_int7
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end interface HDF5_read
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@ -43,21 +43,21 @@ module HDF5_utilities
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!> @details for parallel IO, all dimension except for the last need to match
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!--------------------------------------------------------------------------------------------------
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interface HDF5_write
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module procedure HDF5_write_pReal1
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module procedure HDF5_write_pReal2
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module procedure HDF5_write_pReal3
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module procedure HDF5_write_pReal4
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module procedure HDF5_write_pReal5
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module procedure HDF5_write_pReal6
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module procedure HDF5_write_pReal7
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module procedure HDF5_write_real1
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module procedure HDF5_write_real2
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module procedure HDF5_write_real3
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module procedure HDF5_write_real4
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module procedure HDF5_write_real5
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module procedure HDF5_write_real6
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module procedure HDF5_write_real7
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module procedure HDF5_write_pInt1
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module procedure HDF5_write_pInt2
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module procedure HDF5_write_pInt3
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module procedure HDF5_write_pInt4
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module procedure HDF5_write_pInt5
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module procedure HDF5_write_pInt6
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module procedure HDF5_write_pInt7
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module procedure HDF5_write_int1
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module procedure HDF5_write_int2
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module procedure HDF5_write_int3
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module procedure HDF5_write_int4
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module procedure HDF5_write_int5
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module procedure HDF5_write_int6
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module procedure HDF5_write_int7
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end interface HDF5_write
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@ -66,8 +66,8 @@ module HDF5_utilities
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!--------------------------------------------------------------------------------------------------
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interface HDF5_addAttribute
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module procedure HDF5_addAttribute_str
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module procedure HDF5_addAttribute_pInt
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module procedure HDF5_addAttribute_pReal
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module procedure HDF5_addAttribute_int
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module procedure HDF5_addAttribute_real
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end interface HDF5_addAttribute
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@ -86,6 +86,10 @@ module HDF5_utilities
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HDF5_objectExists
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contains
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!--------------------------------------------------------------------------------------------------
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!> @brief open libary and do sanity checks
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_utilities_init
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implicit none
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@ -189,20 +193,20 @@ integer(HID_T) function HDF5_addGroup(fileHandle,groupName)
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integer :: hdferr
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integer(HID_T) :: aplist_id
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!-------------------------------------------------------------------------------------------------
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! creating a property list for data access properties
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!-------------------------------------------------------------------------------------------------
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! creating a property list for data access properties
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call h5pcreate_f(H5P_GROUP_ACCESS_F, aplist_id, hdferr)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg = 'HDF5_addGroup: h5pcreate_f ('//trim(groupName)//')')
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!-------------------------------------------------------------------------------------------------
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! setting I/O mode to collective
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!-------------------------------------------------------------------------------------------------
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! setting I/O mode to collective
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#ifdef PETSc
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call h5pset_all_coll_metadata_ops_f(aplist_id, .true., hdferr)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg = 'HDF5_addGroup: h5pset_all_coll_metadata_ops_f ('//trim(groupName)//')')
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#endif
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!-------------------------------------------------------------------------------------------------
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! Create group
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!-------------------------------------------------------------------------------------------------
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! Create group
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call h5gcreate_f(fileHandle, trim(groupName), HDF5_addGroup, hdferr, OBJECT_NAMELEN_DEFAULT_F,gapl_id = aplist_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg = 'HDF5_addGroup: h5gcreate_f ('//trim(groupName)//')')
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@ -336,7 +340,7 @@ end subroutine HDF5_addAttribute_str
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!--------------------------------------------------------------------------------------------------
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!> @brief adds a integer attribute to the path given relative to the location
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_addAttribute_pInt(loc_id,attrLabel,attrValue,path)
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subroutine HDF5_addAttribute_int(loc_id,attrLabel,attrValue,path)
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implicit none
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integer(HID_T), intent(in) :: loc_id
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@ -377,13 +381,13 @@ subroutine HDF5_addAttribute_pInt(loc_id,attrLabel,attrValue,path)
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call h5sclose_f(space_id,hdferr)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_addAttribute_pInt: h5sclose_f')
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end subroutine HDF5_addAttribute_pInt
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end subroutine HDF5_addAttribute_int
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!--------------------------------------------------------------------------------------------------
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!> @brief adds a integer attribute to the path given relative to the location
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_addAttribute_pReal(loc_id,attrLabel,attrValue,path)
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subroutine HDF5_addAttribute_real(loc_id,attrLabel,attrValue,path)
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implicit none
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integer(HID_T), intent(in) :: loc_id
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@ -424,14 +428,13 @@ subroutine HDF5_addAttribute_pReal(loc_id,attrLabel,attrValue,path)
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call h5sclose_f(space_id,hdferr)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_addAttribute_pReal: h5sclose_f')
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end subroutine HDF5_addAttribute_pReal
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end subroutine HDF5_addAttribute_real
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!--------------------------------------------------------------------------------------------------
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!> @brief set link to object in results file
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_setLink(loc_id,target_name,link_name)
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use hdf5
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implicit none
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character(len=*), intent(in) :: target_name, link_name
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@ -454,7 +457,7 @@ end subroutine HDF5_setLink
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!--------------------------------------------------------------------------------------------------
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!> @brief read dataset of type pReal with 1 dimension
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_read_pReal1(loc_id,dataset,datasetName,parallel)
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subroutine HDF5_read_real1(loc_id,dataset,datasetName,parallel)
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implicit none
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real(pReal), intent(inout), dimension(:) :: dataset
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@ -486,16 +489,16 @@ subroutine HDF5_read_pReal1(loc_id,dataset,datasetName,parallel)
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call h5dread_f(dset_id, H5T_NATIVE_DOUBLE,dataset,totalShape, hdferr,&
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file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pReal1: h5dread_f')
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_real1: h5dread_f')
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call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
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end subroutine HDF5_read_pReal1
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end subroutine HDF5_read_real1
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!--------------------------------------------------------------------------------------------------
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!> @brief read dataset of type pReal with 2 dimensions
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_read_pReal2(loc_id,dataset,datasetName,parallel)
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subroutine HDF5_read_real2(loc_id,dataset,datasetName,parallel)
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implicit none
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real(pReal), intent(inout), dimension(:,:) :: dataset
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@ -527,16 +530,16 @@ subroutine HDF5_read_pReal2(loc_id,dataset,datasetName,parallel)
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call h5dread_f(dset_id, H5T_NATIVE_DOUBLE,dataset,totalShape, hdferr,&
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file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pReal2: h5dread_f')
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_real2: h5dread_f')
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call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
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end subroutine HDF5_read_pReal2
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end subroutine HDF5_read_real2
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!--------------------------------------------------------------------------------------------------
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!> @brief read dataset of type pReal with 2 dimensions
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_read_pReal3(loc_id,dataset,datasetName,parallel)
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subroutine HDF5_read_real3(loc_id,dataset,datasetName,parallel)
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implicit none
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real(pReal), intent(inout), dimension(:,:,:) :: dataset
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@ -568,16 +571,16 @@ subroutine HDF5_read_pReal3(loc_id,dataset,datasetName,parallel)
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call h5dread_f(dset_id, H5T_NATIVE_DOUBLE,dataset,totalShape, hdferr,&
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file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pReal3: h5dread_f')
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_real3: h5dread_f')
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call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
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end subroutine HDF5_read_pReal3
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end subroutine HDF5_read_real3
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!--------------------------------------------------------------------------------------------------
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!> @brief read dataset of type pReal with 4 dimensions
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_read_pReal4(loc_id,dataset,datasetName,parallel)
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subroutine HDF5_read_real4(loc_id,dataset,datasetName,parallel)
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implicit none
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real(pReal), intent(inout), dimension(:,:,:,:) :: dataset
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@ -609,16 +612,16 @@ subroutine HDF5_read_pReal4(loc_id,dataset,datasetName,parallel)
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call h5dread_f(dset_id, H5T_NATIVE_DOUBLE,dataset,totalShape, hdferr,&
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file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pReal4: h5dread_f')
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_real4: h5dread_f')
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call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
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end subroutine HDF5_read_pReal4
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end subroutine HDF5_read_real4
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!--------------------------------------------------------------------------------------------------
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!> @brief read dataset of type pReal with 5 dimensions
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_read_pReal5(loc_id,dataset,datasetName,parallel)
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subroutine HDF5_read_real5(loc_id,dataset,datasetName,parallel)
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implicit none
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real(pReal), intent(inout), dimension(:,:,:,:,:) :: dataset
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@ -650,16 +653,16 @@ subroutine HDF5_read_pReal5(loc_id,dataset,datasetName,parallel)
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call h5dread_f(dset_id, H5T_NATIVE_DOUBLE,dataset,totalShape, hdferr,&
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file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pReal5: h5dread_f')
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_real5: h5dread_f')
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call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
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end subroutine HDF5_read_pReal5
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end subroutine HDF5_read_real5
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!--------------------------------------------------------------------------------------------------
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!> @brief read dataset of type pReal with 6 dimensions
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_read_pReal6(loc_id,dataset,datasetName,parallel)
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subroutine HDF5_read_real6(loc_id,dataset,datasetName,parallel)
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implicit none
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real(pReal), intent(inout), dimension(:,:,:,:,:,:) :: dataset
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@ -691,16 +694,16 @@ subroutine HDF5_read_pReal6(loc_id,dataset,datasetName,parallel)
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call h5dread_f(dset_id, H5T_NATIVE_DOUBLE,dataset,totalShape, hdferr,&
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file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pReal6: h5dread_f')
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_real6: h5dread_f')
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call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
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end subroutine HDF5_read_pReal6
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end subroutine HDF5_read_real6
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!--------------------------------------------------------------------------------------------------
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!> @brief read dataset of type pReal with 7 dimensions
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_read_pReal7(loc_id,dataset,datasetName,parallel)
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subroutine HDF5_read_real7(loc_id,dataset,datasetName,parallel)
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implicit none
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real(pReal), intent(inout), dimension(:,:,:,:,:,:,:) :: dataset
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@ -732,17 +735,17 @@ subroutine HDF5_read_pReal7(loc_id,dataset,datasetName,parallel)
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call h5dread_f(dset_id, H5T_NATIVE_DOUBLE,dataset,totalShape, hdferr,&
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file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pReal7: h5dread_f')
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_real7: h5dread_f')
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call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
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end subroutine HDF5_read_pReal7
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end subroutine HDF5_read_real7
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!--------------------------------------------------------------------------------------------------
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!> @brief read dataset of type pInt with 1 dimension
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_read_pInt1(loc_id,dataset,datasetName,parallel)
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subroutine HDF5_read_int1(loc_id,dataset,datasetName,parallel)
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implicit none
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integer, intent(inout), dimension(:) :: dataset
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@ -774,16 +777,16 @@ subroutine HDF5_read_pInt1(loc_id,dataset,datasetName,parallel)
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call h5dread_f(dset_id, H5T_NATIVE_INTEGER,dataset,totalShape, hdferr,&
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file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pInt1: h5dread_f')
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_int1: h5dread_f')
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call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
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end subroutine HDF5_read_pInt1
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end subroutine HDF5_read_int1
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!--------------------------------------------------------------------------------------------------
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!> @brief read dataset of type pInt with 2 dimensions
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_read_pInt2(loc_id,dataset,datasetName,parallel)
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subroutine HDF5_read_int2(loc_id,dataset,datasetName,parallel)
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implicit none
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integer, intent(inout), dimension(:,:) :: dataset
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@ -815,16 +818,16 @@ subroutine HDF5_read_pInt2(loc_id,dataset,datasetName,parallel)
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call h5dread_f(dset_id, H5T_NATIVE_INTEGER,dataset,totalShape, hdferr,&
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file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pInt2: h5dread_f')
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_int2: h5dread_f')
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call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
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end subroutine HDF5_read_pInt2
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end subroutine HDF5_read_int2
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!--------------------------------------------------------------------------------------------------
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!> @brief read dataset of type pInt with 3 dimensions
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!--------------------------------------------------------------------------------------------------
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subroutine HDF5_read_pInt3(loc_id,dataset,datasetName,parallel)
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subroutine HDF5_read_int3(loc_id,dataset,datasetName,parallel)
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implicit none
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integer, intent(inout), dimension(:,:,:) :: dataset
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@ -856,16 +859,16 @@ subroutine HDF5_read_pInt3(loc_id,dataset,datasetName,parallel)
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call h5dread_f(dset_id, H5T_NATIVE_INTEGER,dataset,totalShape, hdferr,&
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file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pInt3: h5dread_f')
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if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_int3: h5dread_f')
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call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
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end subroutine HDF5_read_pInt3
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end subroutine HDF5_read_int3
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!--------------------------------------------------------------------------------------------------
|
||||
!> @brief read dataset of type pInt withh 4 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_read_pInt4(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_read_int4(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:,:,:,:) :: dataset
|
||||
|
|
@ -897,16 +900,16 @@ subroutine HDF5_read_pInt4(loc_id,dataset,datasetName,parallel)
|
|||
|
||||
call h5dread_f(dset_id, H5T_NATIVE_INTEGER,dataset,totalShape, hdferr,&
|
||||
file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pInt4: h5dread_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_int4: h5dread_f')
|
||||
|
||||
call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
|
||||
|
||||
end subroutine HDF5_read_pInt4
|
||||
end subroutine HDF5_read_int4
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief read dataset of type pInt with 5 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_read_pInt5(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_read_int5(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:,:,:,:,:) :: dataset
|
||||
|
|
@ -938,16 +941,16 @@ subroutine HDF5_read_pInt5(loc_id,dataset,datasetName,parallel)
|
|||
|
||||
call h5dread_f(dset_id, H5T_NATIVE_INTEGER,dataset,totalShape, hdferr,&
|
||||
file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pInt5: h5dread_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_int5: h5dread_f')
|
||||
|
||||
call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
|
||||
|
||||
end subroutine HDF5_read_pInt5
|
||||
end subroutine HDF5_read_int5
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief read dataset of type pInt with 6 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_read_pInt6(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_read_int6(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:,:,:,:,:,:) :: dataset
|
||||
|
|
@ -979,16 +982,16 @@ subroutine HDF5_read_pInt6(loc_id,dataset,datasetName,parallel)
|
|||
|
||||
call h5dread_f(dset_id, H5T_NATIVE_INTEGER,dataset,totalShape, hdferr,&
|
||||
file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pInt6: h5dread_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_int6: h5dread_f')
|
||||
|
||||
call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
|
||||
|
||||
end subroutine HDF5_read_pInt6
|
||||
end subroutine HDF5_read_int6
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief read dataset of type pInt with 7 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_read_pInt7(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_read_int7(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:,:,:,:,:,:,:) :: dataset
|
||||
|
|
@ -1020,17 +1023,17 @@ subroutine HDF5_read_pInt7(loc_id,dataset,datasetName,parallel)
|
|||
|
||||
call h5dread_f(dset_id, H5T_NATIVE_INTEGER,dataset,totalShape, hdferr,&
|
||||
file_space_id = filespace_id, xfer_prp = plist_id, mem_space_id = memspace_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_pInt7: h5dread_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_read_int7: h5dread_f')
|
||||
|
||||
call finalize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_id)
|
||||
|
||||
end subroutine HDF5_read_pInt7
|
||||
end subroutine HDF5_read_int7
|
||||
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pReal with 1 dimension
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pReal1(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_real1(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
real(pReal), intent(inout), dimension(:) :: dataset
|
||||
|
|
@ -1059,19 +1062,20 @@ subroutine HDF5_write_pReal1(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape,loc_id,myShape,datasetName,H5T_NATIVE_DOUBLE,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_DOUBLE,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pReal1: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_real1: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pReal1
|
||||
end subroutine HDF5_write_real1
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pReal with 2 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pReal2(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_real2(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
real(pReal), intent(inout), dimension(:,:) :: dataset
|
||||
|
|
@ -1100,19 +1104,20 @@ subroutine HDF5_write_pReal2(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_DOUBLE,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_DOUBLE,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pReal2: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_real2: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pReal2
|
||||
end subroutine HDF5_write_real2
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pReal with 3 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pReal3(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_real3(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
real(pReal), intent(inout), dimension(:,:,:) :: dataset
|
||||
|
|
@ -1141,19 +1146,20 @@ subroutine HDF5_write_pReal3(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_DOUBLE,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_DOUBLE,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pReal3: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_real3: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pReal3
|
||||
end subroutine HDF5_write_real3
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pReal with 4 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pReal4(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_real4(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
real(pReal), intent(inout), dimension(:,:,:,:) :: dataset
|
||||
|
|
@ -1182,20 +1188,21 @@ subroutine HDF5_write_pReal4(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_DOUBLE,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_DOUBLE,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pReal4: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_real4: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pReal4
|
||||
end subroutine HDF5_write_real4
|
||||
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pReal with 5 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pReal5(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_real5(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
real(pReal), intent(inout), dimension(:,:,:,:,:) :: dataset
|
||||
|
|
@ -1224,19 +1231,20 @@ subroutine HDF5_write_pReal5(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_DOUBLE,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_DOUBLE,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pReal5: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_real5: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pReal5
|
||||
end subroutine HDF5_write_real5
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pReal with 6 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pReal6(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_real6(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
real(pReal), intent(inout), dimension(:,:,:,:,:,:) :: dataset
|
||||
|
|
@ -1265,19 +1273,20 @@ subroutine HDF5_write_pReal6(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_DOUBLE,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_DOUBLE,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pReal6: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_real6: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pReal6
|
||||
end subroutine HDF5_write_real6
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pReal with 7 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pReal7(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_real7(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
real(pReal), intent(inout), dimension(:,:,:,:,:,:,:) :: dataset
|
||||
|
|
@ -1306,20 +1315,21 @@ subroutine HDF5_write_pReal7(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_DOUBLE,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_DOUBLE,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pReal7: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_real7: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pReal7
|
||||
end subroutine HDF5_write_real7
|
||||
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pInt with 1 dimension
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pInt1(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_int1(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:) :: dataset
|
||||
|
|
@ -1348,19 +1358,20 @@ subroutine HDF5_write_pInt1(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_INTEGER,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_INTEGER,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pInt1: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_int1: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pInt1
|
||||
end subroutine HDF5_write_int1
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pInt with 2 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pInt2(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_int2(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:,:) :: dataset
|
||||
|
|
@ -1389,19 +1400,20 @@ subroutine HDF5_write_pInt2(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_INTEGER,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_INTEGER,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pInt2: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_int2: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pInt2
|
||||
end subroutine HDF5_write_int2
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pInt with 3 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pInt3(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_int3(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:,:,:) :: dataset
|
||||
|
|
@ -1430,19 +1442,20 @@ subroutine HDF5_write_pInt3(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_INTEGER,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_INTEGER,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pInt3: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_int3: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pInt3
|
||||
end subroutine HDF5_write_int3
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pInt with 4 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pInt4(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_int4(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:,:,:,:) :: dataset
|
||||
|
|
@ -1471,19 +1484,20 @@ subroutine HDF5_write_pInt4(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_INTEGER,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_INTEGER,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pInt4: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_int4: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pInt4
|
||||
end subroutine HDF5_write_int4
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pInt with 5 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pInt5(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_int5(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:,:,:,:,:) :: dataset
|
||||
|
|
@ -1512,19 +1526,20 @@ subroutine HDF5_write_pInt5(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_INTEGER,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_INTEGER,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pInt5: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_int5: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pInt5
|
||||
end subroutine HDF5_write_int5
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pInt with 6 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pInt6(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_int6(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:,:,:,:,:,:) :: dataset
|
||||
|
|
@ -1553,19 +1568,20 @@ subroutine HDF5_write_pInt6(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_INTEGER,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_INTEGER,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pInt6: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_int6: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pInt6
|
||||
end subroutine HDF5_write_int6
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief write dataset of type pInt with 7 dimensions
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_write_pInt7(loc_id,dataset,datasetName,parallel)
|
||||
subroutine HDF5_write_int7(loc_id,dataset,datasetName,parallel)
|
||||
|
||||
implicit none
|
||||
integer, intent(inout), dimension(:,:,:,:,:,:,:) :: dataset
|
||||
|
|
@ -1594,14 +1610,15 @@ subroutine HDF5_write_pInt7(loc_id,dataset,datasetName,parallel)
|
|||
myStart, totalShape, loc_id,myShape,datasetName,H5T_NATIVE_INTEGER,.false.)
|
||||
endif
|
||||
|
||||
if (product(totalShape) /= 0) &
|
||||
if (product(totalShape) /= 0) then
|
||||
call h5dwrite_f(dset_id, H5T_NATIVE_INTEGER,dataset,int(totalShape,HSIZE_T), hdferr,&
|
||||
file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_pInt7: h5dwrite_f')
|
||||
if (hdferr < 0) call IO_error(1_pInt,ext_msg='HDF5_write_int7: h5dwrite_f')
|
||||
endif
|
||||
|
||||
call finalize_write(plist_id, dset_id, filespace_id, memspace_id)
|
||||
|
||||
end subroutine HDF5_write_pInt7
|
||||
end subroutine HDF5_write_int7
|
||||
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
|
|
|
|||
|
|
@ -5,9 +5,6 @@
|
|||
!> @author Martin Diehl, Max-Planck-Institut für Eisenforschung GmbH
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
module results
|
||||
use prec
|
||||
use IO
|
||||
use HDF5
|
||||
use HDF5_utilities
|
||||
#ifdef PETSc
|
||||
use PETSC
|
||||
|
|
@ -135,8 +132,6 @@ end function results_addGroup
|
|||
!> @brief set link to object in results file
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine results_setLink(path,link)
|
||||
use hdf5_utilities, only: &
|
||||
HDF5_setLink
|
||||
|
||||
implicit none
|
||||
character(len=*), intent(in) :: path, link
|
||||
|
|
@ -163,7 +158,6 @@ end subroutine results_addAttribute
|
|||
!> @brief remove link to an object
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine results_removeLink(link)
|
||||
use hdf5
|
||||
|
||||
implicit none
|
||||
character(len=*), intent(in) :: link
|
||||
|
|
@ -313,7 +307,6 @@ end subroutine results_writeTensorDataset_int
|
|||
!> @brief adds the unique mapping from spatial position and constituent ID to results
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine HDF5_mappingPhase(mapping,mapping2,Nconstituents,material_phase,phase_name,dataspace_size,mpiOffset,mpiOffset_phase)
|
||||
use hdf5
|
||||
|
||||
implicit none
|
||||
integer(pInt), intent(in) :: Nconstituents, dataspace_size, mpiOffset
|
||||
|
|
|
|||
Loading…
Reference in New Issue