diff --git a/processing/post/3Dvisualize b/processing/post/3Dvisualize index 8e38eb93a..636de65b7 100755 --- a/processing/post/3Dvisualize +++ b/processing/post/3Dvisualize @@ -315,8 +315,9 @@ for filename in args: m = re.search('(\d+)\shead',content[0],re.I) if m == None: continue - print filename - + print filename, + sys.stdout.flush() + headrow = int(m.group(1)) headings = content[headrow].split() column = {} @@ -342,7 +343,7 @@ for filename in args: break if column['tensor'][options.defgrad] < 0: - print 'missing deformation gradient..!' + print 'missing deformation gradient "%s"..!'%options.defgrad continue column['vector'] = {} @@ -376,12 +377,15 @@ for filename in args: res = numpy.array([len(grid[0]),\ len(grid[1]),\ len(grid[2]),],'i') - dim = numpy.array([max(map(float,grid[0].keys()))-min(map(float,grid[0].keys())),\ - max(map(float,grid[1].keys()))-min(map(float,grid[1].keys())),\ - max(map(float,grid[2].keys()))-min(map(float,grid[2].keys())),]*res/(res-numpy.ones(3)), 'd') + + dim = numpy.ones(3) + + for i,r in enumerate(res): + if r > 1: + dim[i] = (max(map(float,grid[i].keys()))-min(map(float,grid[i].keys())))*r/(r-1.0) + + print res,dim - print 'resolution',res - print 'dimension',dim defgrad_av = postprocessingMath.tensor_avg(res[0],res[1],res[2],\ numpy.reshape(values[:,column['tensor'][options.defgrad]: column['tensor'][options.defgrad]+9], @@ -410,6 +414,6 @@ for filename in args: out['box'] = vtk_writeASCII_box(dim,defgrad_av) for what in out.keys(): - vtk = open(os.path.splitext(filename)[0]+'_%s.vtk'%what, 'w') + vtk = open('%s_'%what+os.path.splitext(filename)[0]+'.vtk', 'w') output(out[what],{'filepointer':vtk},'File') vtk.close()