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DAMASK_EICMD
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use modern Fortran interface 

not possible for HDF5...
This commit is contained in:
Martin Diehl 2022-02-05 18:32:17 +01:00
parent f36db86b3c
commit 12e7922faf
2 changed files with 18 additions and 17 deletions
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33
src/HDF5_utilities.f90
View File

@ -10,8 +10,9 @@ module HDF5_utilities
#include <petsc/finclude/petscsys.h>
use PETScSys
#if (PETSC_VERSION_MAJOR==3 && PETSC_VERSION_MINOR>14) && !defined(PETSC_HAVE_MPI_F90MODULE_VISIBILITY)
use MPI
use MPI_f08
#endif
use MPI, only: MPI_INFO_NULL_F90 => MPI_INFO_NULL
#endif
use prec
@ -162,9 +163,9 @@ integer(HID_T) function HDF5_openFile(fileName,mode,parallel)
character, intent(in), optional :: mode
logical, intent(in), optional :: parallel
character :: m
integer(HID_T) :: plist_id
integer :: hdferr
character :: m
integer(HID_T) :: plist_id
integer :: hdferr
if (present(mode)) then
@ -178,9 +179,9 @@ integer(HID_T) function HDF5_openFile(fileName,mode,parallel)
#ifdef PETSC
if (present(parallel)) then
if (parallel) call H5Pset_fapl_mpio_f(plist_id, PETSC_COMM_WORLD, MPI_INFO_NULL, hdferr)
if (parallel) call H5Pset_fapl_mpio_f(plist_id, PETSC_COMM_WORLD, MPI_INFO_NULL_F90, hdferr)
else
call H5Pset_fapl_mpio_f(plist_id, PETSC_COMM_WORLD, MPI_INFO_NULL, hdferr)
call H5Pset_fapl_mpio_f(plist_id, PETSC_COMM_WORLD, MPI_INFO_NULL_F90, hdferr)
end if
if(hdferr < 0) error stop 'HDF5 error'
#endif
@ -1860,7 +1861,7 @@ subroutine initialize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_
globalShape !< shape of the dataset (all processes)
integer(HID_T), intent(out) :: dset_id, filespace_id, memspace_id, plist_id, aplist_id
integer, dimension(worldsize) :: &
integer(MPI_INTEGER_KIND), dimension(worldsize) :: &
readSize !< contribution of all processes
integer :: hdferr
integer(MPI_INTEGER_KIND) :: err_MPI
@ -1871,13 +1872,13 @@ subroutine initialize_read(dset_id, filespace_id, memspace_id, plist_id, aplist_
if(hdferr < 0) error stop 'HDF5 error'
!--------------------------------------------------------------------------------------------------
readSize = 0
readSize(worldrank+1) = int(localShape(ubound(localShape,1)))
readSize = 0_MPI_INTEGER_KIND
readSize(worldrank+1) = int(localShape(ubound(localShape,1)),MPI_INTEGER_KIND)
#ifdef PETSC
if (parallel) then
call H5Pset_dxpl_mpio_f(plist_id, H5FD_MPIO_COLLECTIVE_F, hdferr)
if(hdferr < 0) error stop 'HDF5 error'
call MPI_allreduce(MPI_IN_PLACE,readSize,worldsize,MPI_INTEGER,MPI_SUM,PETSC_COMM_WORLD,err_MPI) ! get total output size over each process
call MPI_Allreduce(MPI_IN_PLACE,readSize,worldsize,MPI_INTEGER,MPI_SUM,MPI_COMM_WORLD,err_MPI) ! get total output size over each process
if (err_MPI /= 0_MPI_INTEGER_KIND) error stop 'MPI error'
end if
#endif
@ -1954,8 +1955,8 @@ subroutine initialize_write(dset_id, filespace_id, memspace_id, plist_id, &
totalShape !< shape of the dataset (all processes)
integer(HID_T), intent(out) :: dset_id, filespace_id, memspace_id, plist_id
integer, dimension(worldsize) :: writeSize !< contribution of all processes
integer(HID_T) :: dcpl
integer(MPI_INTEGER_KIND), dimension(worldsize) :: writeSize !< contribution of all processes
integer(HID_T) :: dcpl
integer :: hdferr
integer(MPI_INTEGER_KIND) :: err_MPI
integer(HSIZE_T), parameter :: chunkSize = 1024_HSIZE_T**2/8_HSIZE_T
@ -1974,11 +1975,11 @@ subroutine initialize_write(dset_id, filespace_id, memspace_id, plist_id, &
!--------------------------------------------------------------------------------------------------
! determine the global data layout among all processes
writeSize = 0
writeSize(worldrank+1) = int(myShape(ubound(myShape,1)))
writeSize = 0_MPI_INTEGER_KIND
writeSize(worldrank+1) = int(myShape(ubound(myShape,1)),MPI_INTEGER_KIND)
#ifdef PETSC
if (parallel) then
call MPI_allreduce(MPI_IN_PLACE,writeSize,worldsize,MPI_INTEGER,MPI_SUM,PETSC_COMM_WORLD,err_MPI) ! get total output size over each process
call MPI_Allreduce(MPI_IN_PLACE,writeSize,worldsize,MPI_INTEGER,MPI_SUM,MPI_COMM_WORLD,err_MPI) ! get total output size over each process
if (err_MPI /= 0_MPI_INTEGER_KIND) error stop 'MPI error'
end if
#endif
@ -2009,7 +2010,7 @@ subroutine initialize_write(dset_id, filespace_id, memspace_id, plist_id, &
if (hdferr < 0) error stop 'HDF5 error'
end if
end if
!--------------------------------------------------------------------------------------------------
! create dataspace in memory (local shape) and in file (global shape)
call H5Screate_simple_f(size(myShape), myShape, memspace_id, hdferr, myShape)

2
src/phase_mechanical_eigen_thermalexpansion.f90
View File

@ -27,7 +27,7 @@ module function thermalexpansion_init(kinematics_length) result(myKinematics)
integer, intent(in) :: kinematics_length
logical, dimension(:,:), allocatable :: myKinematics
integer :: Ninstances,p,i,k
integer :: Ninstances, p, k
class(tNode), pointer :: &
phases, &
phase, &