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DAMASK_EICMD
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set ID flag and line endings

This commit is contained in:
Philip Eisenlohr 2012-02-09 13:06:22 +00:00
parent 195491aaaa
commit 0f7c74e02d
3 changed files with 211 additions and 211 deletions
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4
processing/post/addCalculation.py
View File

@ -30,7 +30,7 @@ class extendableOption(Option):
parser = OptionParser(option_class=extendableOption, usage='%prog options [file[s]]', description = """ parser = OptionParser(option_class=extendableOption, usage='%prog options [file[s]]', description = """
Add column(s) with derived values according to user defined arithmetic operation between column(s). Add column(s) with derived values according to user defined arithmetic operation between column(s).
""" + string.replace('$Id: addNorm.py 1118 2011-11-23 14:54:53Z MPIE\p.eisenlohr $','\n','\\n') """ + string.replace('$Id$','\n','\\n')
) )
@ -64,7 +64,7 @@ for file in files:
table = damask.ASCIItable(file['input'],file['output'],False) # make unbuffered ASCII_table table = damask.ASCIItable(file['input'],file['output'],False) # make unbuffered ASCII_table
table.head_read() # read ASCII header info table.head_read() # read ASCII header info
table.info_append(string.replace('$Id: addNorm.py 1118 2011-11-23 14:54:53Z MPIE\p.eisenlohr $','\n','\\n') + \ table.info_append(string.replace('$Id$','\n','\\n') + \
'\t' + ' '.join(sys.argv[1:])) '\t' + ' '.join(sys.argv[1:]))
column = {} column = {}

72
processing/post/colormap_io.py
View File

@ -1,36 +1,36 @@
#!/usr/bin/env python #!/usr/bin/env python
# -*- coding: iso-8859-1 -*- # -*- coding: iso-8859-1 -*-
def write_gsmh(RGB_vector,name): def write_gsmh(RGB_vector,name):
colormap = open(str(name) + '.map',"w") colormap = open(str(name) + '.map',"w")
colormap.write('View.ColorTable = {\n') colormap.write('View.ColorTable = {\n')
for i in range(len(RGB_vector)-1): for i in range(len(RGB_vector)-1):
colormap.write('{'+str((RGB_vector[0][i])*255.0)+','+str((RGB_vector[0][i])*255.0)+','+str((RGB_vector[0][i])*255.0)+'},\n') colormap.write('{'+str((RGB_vector[0][i])*255.0)+','+str((RGB_vector[0][i])*255.0)+','+str((RGB_vector[0][i])*255.0)+'},\n')
colormap.write('{'+str((RGB_vector[0][-1])*255.0)+','+str((RGB_vector[0][-1])*255.0)+','+str((RGB_vector[0][-1])*255.0)+'}}') colormap.write('{'+str((RGB_vector[0][-1])*255.0)+','+str((RGB_vector[0][-1])*255.0)+','+str((RGB_vector[0][-1])*255.0)+'}}')
file.close(colormap) file.close(colormap)
def write_paraview(RGB_vector,name): def write_paraview(RGB_vector,name):
colormap = open(str(name) + '.xml',"w") colormap = open(str(name) + '.xml',"w")
colormap.write('<ColorMap name = "'+ str(name)+ '" space = "RGB">\n') colormap.write('<ColorMap name = "'+ str(name)+ '" space = "RGB">\n')
for i in range(len(RGB_vector)): for i in range(len(RGB_vector)):
colormap.write('<Point x="'+str(i)+'" o="1" r="'+str(RGB_vector[0][i])+'" g="'+str(RGB_vector[1][i])+'" b="'+str(RGB_vector[2][i])+'"/>\n') colormap.write('<Point x="'+str(i)+'" o="1" r="'+str(RGB_vector[0][i])+'" g="'+str(RGB_vector[1][i])+'" b="'+str(RGB_vector[2][i])+'"/>\n')
colormap.write('</ColorMap>') colormap.write('</ColorMap>')
file.close(colormap) file.close(colormap)
def write_paraview2(RGB_vector,name): def write_paraview2(RGB_vector,name):
colormap = open(str(name) + '.xml',"w") colormap = open(str(name) + '.xml',"w")
colormap.write('<ColorMap name = "'+ str(name)+ '" space = "RGB">\n') colormap.write('<ColorMap name = "'+ str(name)+ '" space = "RGB">\n')
for i in range(len(RGB_vector)/3): for i in range(len(RGB_vector)/3):
colormap.write('<Point x="'+str(i)+'" o="1" r="'+str(RGB_vector[i*3])+'" g="'+str(RGB_vector[i*3+1])+'" b="'+str(RGB_vector[i*3+2])+'"/>\n') colormap.write('<Point x="'+str(i)+'" o="1" r="'+str(RGB_vector[i*3])+'" g="'+str(RGB_vector[i*3+1])+'" b="'+str(RGB_vector[i*3+2])+'"/>\n')
colormap.write('</ColorMap>') colormap.write('</ColorMap>')
file.close(colormap) file.close(colormap)
def write_raw(RGB_vector,name): def write_raw(RGB_vector,name):
colormap = open(str(name) + '.colormap',"w") colormap = open(str(name) + '.colormap',"w")
colormap.write('ColorMap name = ' + str(name)+'\n') colormap.write('ColorMap name = ' + str(name)+'\n')
for i in range(len(RGB_vector)): for i in range(len(RGB_vector)):
colormap.write(str(RGB_vector[0][i])+'\t'+str(RGB_vector[1][i])+'\t'+str(RGB_vector[2][i])+'\n') colormap.write(str(RGB_vector[0][i])+'\t'+str(RGB_vector[1][i])+'\t'+str(RGB_vector[2][i])+'\n')
file.close(colormap) file.close(colormap)
def read_raw(filename): def read_raw(filename):
print 'void' print 'void'

346
processing/post/convert_colormodels.py
View File

@ -1,173 +1,173 @@
#!/usr/bin/env python #!/usr/bin/env python
# -*- coding: iso-8859-1 -*- # -*- coding: iso-8859-1 -*-
import math import math
# from http://code.activestate.com/recipes/121574-matrix-vector-multiplication/ # from http://code.activestate.com/recipes/121574-matrix-vector-multiplication/
def matmult(m, v): def matmult(m, v):
nrows = len(m) nrows = len(m)
w = [None] * nrows w = [None] * nrows
for row in range(nrows): for row in range(nrows):
w[row] = reduce(lambda x,y: x+y, map(lambda x,y: x*y, m[row], v)) w[row] = reduce(lambda x,y: x+y, map(lambda x,y: x*y, m[row], v))
return w return w
# convert H(ue) S(aturation) L(uminance) to R(ot) G(elb) B(lau) # convert H(ue) S(aturation) L(uminance) to R(ot) G(elb) B(lau)
# with S,L,R,G,B running from 0 to 1, H running from 0 to 360 # with S,L,R,G,B running from 0 to 1, H running from 0 to 360
# from http://en.wikipedia.org/wiki/HSL_and_HSV # from http://en.wikipedia.org/wiki/HSL_and_HSV
def HSL2RGB(HSL): def HSL2RGB(HSL):
RGB = [0.0,0.0,0.0] RGB = [0.0,0.0,0.0]
H_strich = HSL[0]/60.0 H_strich = HSL[0]/60.0
c = (1.0- abs(2.0 * HSL[2] - 1.0))*HSL[1] c = (1.0- abs(2.0 * HSL[2] - 1.0))*HSL[1]
x = c*(1.0- abs(H_strich%2-1.0)) x = c*(1.0- abs(H_strich%2-1.0))
m = HSL[2] -.5*c m = HSL[2] -.5*c
if (0.0 <= H_strich)and(H_strich<1.0): if (0.0 <= H_strich)and(H_strich<1.0):
RGB[0] = c + m RGB[0] = c + m
RGB[1] = x + m RGB[1] = x + m
RGB[2] = 0.0 + m RGB[2] = 0.0 + m
elif (1.0 <= H_strich)and(H_strich<2.0): elif (1.0 <= H_strich)and(H_strich<2.0):
RGB[0] = x + m RGB[0] = x + m
RGB[1] = c + m RGB[1] = c + m
RGB[2] = 0.0 + m RGB[2] = 0.0 + m
elif (2.0 <= H_strich)and(H_strich<3.0): elif (2.0 <= H_strich)and(H_strich<3.0):
RGB[0] = 0.0 + m RGB[0] = 0.0 + m
RGB[1] = c + m RGB[1] = c + m
RGB[2] = x + m RGB[2] = x + m
elif (3.0 <= H_strich)and(H_strich<4.0): elif (3.0 <= H_strich)and(H_strich<4.0):
RGB[0] = 0.0 + m RGB[0] = 0.0 + m
RGB[1] = x + m RGB[1] = x + m
RGB[2] = c + m RGB[2] = c + m
elif (4.0 <= H_strich)and(H_strich<5.0): elif (4.0 <= H_strich)and(H_strich<5.0):
RGB[0] = x + m RGB[0] = x + m
RGB[1] = 0.0 + m RGB[1] = 0.0 + m
RGB[2] = c + m RGB[2] = c + m
elif (5.0 <= H_strich)and(H_strich<=6.0): elif (5.0 <= H_strich)and(H_strich<=6.0):
RGB[0] = c + m RGB[0] = c + m
RGB[1] = 0.0 + m RGB[1] = 0.0 + m
RGB[2] = x + m RGB[2] = x + m
for i in range(3): for i in range(3):
RGB[i] = min(RGB[i],1.0) RGB[i] = min(RGB[i],1.0)
RGB[i] = max(RGB[i],0.0) RGB[i] = max(RGB[i],0.0)
return RGB return RGB
# convert R(ot) G(elb) B(lau) to H(ue) S(aturation) L(uminance) # convert R(ot) G(elb) B(lau) to H(ue) S(aturation) L(uminance)
# with S,L,R,G,B running from 0 to 1, H running from 0 to 360 # with S,L,R,G,B running from 0 to 1, H running from 0 to 360
# from http://130.113.54.154/~monger/hsl-rgb.html # from http://130.113.54.154/~monger/hsl-rgb.html
def RGB2HSL(RGB): def RGB2HSL(RGB):
HSL = [0.0,0.0,0.0] HSL = [0.0,0.0,0.0]
maxcolor = max(RGB) maxcolor = max(RGB)
mincolor = min(RGB) mincolor = min(RGB)
HSL[2] = (maxcolor + mincolor)/2.0 HSL[2] = (maxcolor + mincolor)/2.0
if(mincolor == maxcolor): if(mincolor == maxcolor):
HSL[0] = 0.0 HSL[0] = 0.0
HSL[1] = 0.0 HSL[1] = 0.0
else: else:
if (HSL[2]<0.5): if (HSL[2]<0.5):
HSL[1] = (maxcolor - mincolor)/(maxcolor + mincolor) HSL[1] = (maxcolor - mincolor)/(maxcolor + mincolor)
else: else:
HSL[1] = (maxcolor - mincolor)/(2.0 -maxcolor -mincolor) HSL[1] = (maxcolor - mincolor)/(2.0 -maxcolor -mincolor)
if (maxcolor == RGB[0]): if (maxcolor == RGB[0]):
HSL[0] = 0.0 + (RGB[1] - RGB[2])/(maxcolor - mincolor) HSL[0] = 0.0 + (RGB[1] - RGB[2])/(maxcolor - mincolor)
elif (maxcolor == RGB[1]): elif (maxcolor == RGB[1]):
HSL[0] = 2.0 + (RGB[2] - RGB[0])/(maxcolor - mincolor) HSL[0] = 2.0 + (RGB[2] - RGB[0])/(maxcolor - mincolor)
elif (maxcolor == RGB[2]): elif (maxcolor == RGB[2]):
HSL[0] = 4.0 + (RGB[0] - RGB[1])/(maxcolor - mincolor) HSL[0] = 4.0 + (RGB[0] - RGB[1])/(maxcolor - mincolor)
HSL[0] = HSL[0]*60.0 HSL[0] = HSL[0]*60.0
if (HSL[0] < 0.0): if (HSL[0] < 0.0):
HSL[0] = HSL[0] + 360.0 HSL[0] = HSL[0] + 360.0
for i in range(2): for i in range(2):
HSL[i+1] = min(HSL[i+1],1.0) HSL[i+1] = min(HSL[i+1],1.0)
HSL[i+1] = max(HSL[i+1],0.0) HSL[i+1] = max(HSL[i+1],0.0)
return HSL return HSL
# convert R(ot) G(elb) B(lau) to CIE XYZ # convert R(ot) G(elb) B(lau) to CIE XYZ
# with all values in the range of 0 to 1 # with all values in the range of 0 to 1
# from http://www.cs.rit.edu/~ncs/color/t_convert.html # from http://www.cs.rit.edu/~ncs/color/t_convert.html
def RGB2XYZ(RGB): def RGB2XYZ(RGB):
XYZ = [0.0,0.0,0.0] XYZ = [0.0,0.0,0.0]
RGB_lin = [0.0,0.0,0.0] RGB_lin = [0.0,0.0,0.0]
for i in range(3): for i in range(3):
if (RGB[i] > 0.04045): if (RGB[i] > 0.04045):
RGB_lin[i] = ((RGB[i]+0.0555)/1.0555)**2.4 RGB_lin[i] = ((RGB[i]+0.0555)/1.0555)**2.4
else: else:
RGB_lin[i] = RGB[i]/12.92 RGB_lin[i] = RGB[i]/12.92
convert =[[0.412453,0.357580,0.180423],[0.212671,0.715160,0.072169],[0.019334,0.119193,0.950227]] convert =[[0.412453,0.357580,0.180423],[0.212671,0.715160,0.072169],[0.019334,0.119193,0.950227]]
XYZ = matmult(convert,RGB_lin) XYZ = matmult(convert,RGB_lin)
for i in range(3): for i in range(3):
XYZ[i] = min(XYZ[i],1.0) XYZ[i] = min(XYZ[i],1.0)
XYZ[i] = max(XYZ[i],0.0) XYZ[i] = max(XYZ[i],0.0)
return XYZ return XYZ
# convert CIE XYZ R(ot) G(elb) B(lau) # convert CIE XYZ R(ot) G(elb) B(lau)
# with all values in the range of 0 to 1 # with all values in the range of 0 to 1
# from http://www.cs.rit.edu/~ncs/color/t_convert.html # from http://www.cs.rit.edu/~ncs/color/t_convert.html
def XYZ2RGB(XYZ): def XYZ2RGB(XYZ):
RGB_lin = [0.0,0.0,0.0] RGB_lin = [0.0,0.0,0.0]
RGB = [0.0,0.0,0.0] RGB = [0.0,0.0,0.0]
convert =[[3.240479,-1.537150,-0.498535],[-0.969256,1.875992,0.041556],[0.055648,-0.204043,1.057311]] convert =[[3.240479,-1.537150,-0.498535],[-0.969256,1.875992,0.041556],[0.055648,-0.204043,1.057311]]
RGB_lin = matmult(convert,XYZ) RGB_lin = matmult(convert,XYZ)
for i in range(3): for i in range(3):
if (RGB_lin[i] > 0.0031308): if (RGB_lin[i] > 0.0031308):
RGB[i] = ((RGB_lin[i])**(1.0/2.4))*1.0555-0.0555 RGB[i] = ((RGB_lin[i])**(1.0/2.4))*1.0555-0.0555
else: else:
RGB[i] = RGB_lin[i]*12.92 RGB[i] = RGB_lin[i]*12.92
for i in range(3): for i in range(3):
RGB[i] = min(RGB[i],1.0) RGB[i] = min(RGB[i],1.0)
RGB[i] = max(RGB[i],0.0) RGB[i] = max(RGB[i],0.0)
return RGB return RGB
# convert CIE Lab to CIE XYZ # convert CIE Lab to CIE XYZ
# with XYZ in the range of 0 to 1 # with XYZ in the range of 0 to 1
# from http://en.wikipedia.org/wiki/Lab_color_space, http://www.cs.rit.edu/~ncs/color/t_convert.html # from http://en.wikipedia.org/wiki/Lab_color_space, http://www.cs.rit.edu/~ncs/color/t_convert.html
def CIELab2XYZ(Lab,white): def CIELab2XYZ(Lab,white):
XYZ = [0.0,0.0,0.0] XYZ = [0.0,0.0,0.0]
temp = [0.0,0.0,0.0] temp = [0.0,0.0,0.0]
temp[0] = 1.0/116.0 *(Lab[0] + 16.0) + 1/500.0 * Lab[1] temp[0] = 1.0/116.0 *(Lab[0] + 16.0) + 1/500.0 * Lab[1]
temp[1] = 1.0/116.0 *(Lab[0] + 16.0) temp[1] = 1.0/116.0 *(Lab[0] + 16.0)
temp[2] = 1.0/116.0 *(Lab[0] + 16.0) - 1/200.0 * Lab[2] temp[2] = 1.0/116.0 *(Lab[0] + 16.0) - 1/200.0 * Lab[2]
for i in range(3): for i in range(3):
if (temp[i] > 6.0/29.0): if (temp[i] > 6.0/29.0):
temp[i] = temp[i]**(3.0) temp[i] = temp[i]**(3.0)
else: else:
temp[i] =3 * (6.0/29.0)**2 * (temp[i]- 4.0/29.0) temp[i] =3 * (6.0/29.0)**2 * (temp[i]- 4.0/29.0)
XYZ[i] = white[i] * temp[i] XYZ[i] = white[i] * temp[i]
for i in range(3): for i in range(3):
XYZ[i] = min(XYZ[i],1.0) XYZ[i] = min(XYZ[i],1.0)
XYZ[i] = max(XYZ[i],0.0) XYZ[i] = max(XYZ[i],0.0)
return XYZ return XYZ
# convert CIE XYZ to CIE Lab # convert CIE XYZ to CIE Lab
# with XYZ in the range of 0 to 1 # with XYZ in the range of 0 to 1
# from http://en.wikipedia.org/wiki/Lab_color_space, http://www.cs.rit.edu/~ncs/color/t_convert.html # from http://en.wikipedia.org/wiki/Lab_color_space, http://www.cs.rit.edu/~ncs/color/t_convert.html
def XYZ2CIELab(XYZ,white): def XYZ2CIELab(XYZ,white):
temp = [0.0,0.0,0.0] temp = [0.0,0.0,0.0]
Lab = [0.0,0.0,0.0] Lab = [0.0,0.0,0.0]
for i in range(3): for i in range(3):
temp[i] = XYZ[i]/white[i] temp[i] = XYZ[i]/white[i]
if (temp[i] > (6.0/29.0)**3.0): if (temp[i] > (6.0/29.0)**3.0):
temp[i] = temp[i]**(1.0/3.0) temp[i] = temp[i]**(1.0/3.0)
else: else:
temp[i] = 1.0/3.0 * (29.0/6.0)**2.0 * temp[i] + 4.0/29.0 temp[i] = 1.0/3.0 * (29.0/6.0)**2.0 * temp[i] + 4.0/29.0
Lab[0] = 116.0 * temp[1] - 16.0 Lab[0] = 116.0 * temp[1] - 16.0
Lab[1] = 500.0 *(temp[0] - temp[1]) Lab[1] = 500.0 *(temp[0] - temp[1])
Lab[2] = 200.0 *(temp[1] - temp[2]) Lab[2] = 200.0 *(temp[1] - temp[2])
return Lab return Lab
# convert Cie Lab to msh colorspace # convert Cie Lab to msh colorspace
# from http://www.cs.unm.edu/~kmorel/documents/ColorMaps/DivergingColorMapWorkshop.xls # from http://www.cs.unm.edu/~kmorel/documents/ColorMaps/DivergingColorMapWorkshop.xls
def CIELab2Msh(Lab): def CIELab2Msh(Lab):
Msh = [0.0,0.0,0.0] Msh = [0.0,0.0,0.0]
Msh[0] = math.sqrt(Lab[0]**2.0 + Lab[1]**2.0 + Lab[2]**2.0) Msh[0] = math.sqrt(Lab[0]**2.0 + Lab[1]**2.0 + Lab[2]**2.0)
if (Msh[0] != 0.0): if (Msh[0] != 0.0):
Msh[1] = math.acos(Lab[0]/Msh[0]) Msh[1] = math.acos(Lab[0]/Msh[0])
if (Lab[1] != 0.0): if (Lab[1] != 0.0):
Msh[2] = math.atan2(Lab[2],Lab[1]) Msh[2] = math.atan2(Lab[2],Lab[1])
return Msh return Msh
# convert msh colorspace to Cie Lab # convert msh colorspace to Cie Lab
# from http://www.cs.unm.edu/~kmorel/documents/ColorMaps/DivergingColorMapWorkshop.xls # from http://www.cs.unm.edu/~kmorel/documents/ColorMaps/DivergingColorMapWorkshop.xls
def Msh2CIELab(Msh): def Msh2CIELab(Msh):
Lab = [0.0,0.0,0.0] Lab = [0.0,0.0,0.0]
Lab[0] = Msh[0] * math.cos(Msh[1]) Lab[0] = Msh[0] * math.cos(Msh[1])
Lab[1] = Msh[0] * math.sin(Msh[1]) * math.cos(Msh[2]) Lab[1] = Msh[0] * math.sin(Msh[1]) * math.cos(Msh[2])
Lab[2] = Msh[0] * math.sin(Msh[1]) * math.sin(Msh[2]) Lab[2] = Msh[0] * math.sin(Msh[1]) * math.sin(Msh[2])
return Lab return Lab