use only grid, not (x/y/z) start and end
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@ -60,7 +60,6 @@ module grid_mechanical_FEM
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real(pReal), dimension(3) :: delta
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real(pReal), dimension(3,8) :: BMat
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real(pReal), dimension(8,8) :: HGMat
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PetscInt :: xstart,ystart,zstart,xend,yend,zend
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!--------------------------------------------------------------------------------------------------
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! stress, stiffness and compliance average etc.
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@ -146,7 +145,7 @@ subroutine grid_mechanical_FEM_init
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! set default and user defined options for PETSc
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call PetscOptionsInsertString(PETSC_NULL_OPTIONS, &
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'-mechanical_snes_type newtonls -mechanical_ksp_type fgmres &
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&-mechanical_ksp_max_it 25 -mechanical_mg_levels_ksp_type chebyshev', &
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&-mechanical_ksp_max_it 25', &
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err_PETSc)
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CHKERRQ(err_PETSc)
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call PetscOptionsInsertString(PETSC_NULL_OPTIONS,num_grid%get_asString('petsc_options',defaultVal=''),err_PETSc)
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@ -212,11 +211,6 @@ subroutine grid_mechanical_FEM_init
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call DMDAVecGetArrayF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
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CHKERRQ(err_PETSc)
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call DMDAGetCorners(mechanical_grid,xstart,ystart,zstart,xend,yend,zend,err_PETSc) ! local grid extent
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CHKERRQ(err_PETSc)
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xend = xstart+xend-1
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yend = ystart+yend-1
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zend = zstart+zend-1
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delta = geomSize/real(grid,pReal) ! grid spacing
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detJ = product(delta) ! cell volume
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@ -560,14 +554,13 @@ subroutine formResidual(da_local,x_local, &
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!--------------------------------------------------------------------------------------------------
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! get deformation gradient
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call DMDAVecGetArrayF90(da_local,x_local,x_scal,err_PETSc);CHKERRQ(err_PETSc)
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do k = zstart+1, zend+1; do j = 1, grid(2); do i = 1, grid(1)
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do k = grid3offset+1, grid3offset+grid3; do j = 1, grid(2); do i = 1, grid(1)
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ctr = 0
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do kk = -1, 0; do jj = -1, 0; do ii = -1, 0
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ctr = ctr + 1
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x_elem(ctr,1:3) = x_scal(0:2,i+ii,j+jj,k+kk)
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enddo; enddo; enddo
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kk = k-zstart
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F(1:3,1:3,i,j,kk) = params%rotation_BC%rotate(F_aim,active=.true.) + transpose(matmul(BMat,x_elem))
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F(1:3,1:3,i,j,k-grid3offset) = params%rotation_BC%rotate(F_aim,active=.true.) + transpose(matmul(BMat,x_elem))
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enddo; enddo; enddo
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call DMDAVecRestoreArrayF90(da_local,x_local,x_scal,err_PETSc);CHKERRQ(err_PETSc)
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@ -590,15 +583,14 @@ subroutine formResidual(da_local,x_local, &
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call DMDAVecGetArrayF90(da_local,f_local,f_scal,err_PETSc);CHKERRQ(err_PETSc)
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call DMDAVecGetArrayF90(da_local,x_local,x_scal,err_PETSc);CHKERRQ(err_PETSc)
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ele = 0
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do k = zstart+1, zend+1; do j = 1, grid(2); do i = 1, grid(1)
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do k = grid3offset+1, grid3offset+grid3; do j = 1, grid(2); do i = 1, grid(1)
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ctr = 0
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do kk = -1, 0; do jj = -1, 0; do ii = -1, 0
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ctr = ctr + 1
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x_elem(ctr,1:3) = x_scal(0:2,i+ii,j+jj,k+kk)
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enddo; enddo; enddo
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kk = k-zstart
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ele = ele + 1
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f_elem = matmul(transpose(BMat),transpose(P_current(1:3,1:3,i,j,kk)))*detJ + &
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f_elem = matmul(transpose(BMat),transpose(P_current(1:3,1:3,i,j,k-grid3offset)))*detJ + &
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matmul(HGMat,x_elem)*(homogenization_dPdF(1,1,1,1,ele) + &
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homogenization_dPdF(2,2,2,2,ele) + &
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homogenization_dPdF(3,3,3,3,ele))/3.0_pReal
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@ -614,18 +606,18 @@ subroutine formResidual(da_local,x_local, &
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!--------------------------------------------------------------------------------------------------
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! applying boundary conditions
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call DMDAVecGetArrayF90(da_local,f_local,f_scal,err_PETSc);CHKERRQ(err_PETSc)
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if (zstart == 0) then
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f_scal(0:2,xstart,ystart,zstart) = 0.0
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f_scal(0:2,xend+1,ystart,zstart) = 0.0
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f_scal(0:2,xstart,yend+1,zstart) = 0.0
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f_scal(0:2,xend+1,yend+1,zstart) = 0.0
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endif
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if (zend + 1 == grid(3)) then
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f_scal(0:2,xstart,ystart,zend+1) = 0.0
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f_scal(0:2,xend+1,ystart,zend+1) = 0.0
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f_scal(0:2,xstart,yend+1,zend+1) = 0.0
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f_scal(0:2,xend+1,yend+1,zend+1) = 0.0
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endif
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if (grid3offset == 0) then
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f_scal(0:2,0, 0, 0) = 0.0_pReal
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f_scal(0:2,grid(1),0, 0) = 0.0_pReal
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f_scal(0:2,0, grid(2),0) = 0.0_pReal
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f_scal(0:2,grid(1),grid(2),0) = 0.0_pReal
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end if
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if (grid3+grid3offset == grid(3)) then
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f_scal(0:2,0, 0, grid(3)) = 0.0_pReal
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f_scal(0:2,grid(1),0, grid(3)) = 0.0_pReal
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f_scal(0:2,0, grid(2),grid(3)) = 0.0_pReal
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f_scal(0:2,grid(1),grid(2),grid(3)) = 0.0_pReal
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end if
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call DMDAVecRestoreArrayF90(da_local,f_local,f_scal,err_PETSc);CHKERRQ(err_PETSc)
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end subroutine formResidual
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@ -660,7 +652,7 @@ subroutine formJacobian(da_local,x_local,Jac_pre,Jac,dummy,err_PETSc)
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CHKERRQ(err_PETSc)
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call MatZeroEntries(Jac,err_PETSc); CHKERRQ(err_PETSc)
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ele = 0
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do k = zstart+1, zend+1; do j = ystart+1, yend+1; do i = xstart+1, xend+1
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do k = grid3offset+1, grid3offset+grid3; do j = 1, grid(2); do i = 1, grid(1)
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ctr = 0
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do kk = -1, 0; do jj = -1, 0; do ii = -1, 0
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ctr = ctr + 1
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