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DAMASK_EICMD
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again edited the makefile, no there is more flexibility in defining the libraries (FFTW and ACML) 

added the source of fftw-3.3.tar.gz to fulfill the GPL
set_python_env.py was forgotten during last commit (for testing)
This commit is contained in:
Martin Diehl 2011-10-24 16:57:51 +00:00
parent 48aa5eb163
commit 0f34d14bee
3 changed files with 85 additions and 42 deletions
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code/include/fftw-3.3.tar.gz Normal file
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106
code/makefile
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@ -1,28 +1,32 @@
########################################################################################
# Makefile to compile the Material subroutine for BVP solution using spectral method # Makefile to compile the Material subroutine for BVP solution using spectral method
########################################################################################
# Be sure to remove all files compiled with different options by using "make clean"
# #
# use switch on make to determine PRECISION, e.g make PRECISION=single # Uses OpenMP to parallelise the material subroutines (set number of cores with "export DAMASK_NUM_THREADS=n" to n)
# default is PRECISION=double # Uses linux threads to parallelise fftw3
# be sure to remove all librarys with different PRECISION (make clean)
#
# Uses openmp to parallelise the material subroutines (set number of cores with "export DAMASK_NUM_THREADS=n" to n)
# Uses linux threads to parallelise fftw3 (should also be possible with openmp)
# Besides of the f90 files written at MPIE, the two library files of fftw3 "libfftw3_threads.a" "libfftw3.a" are also needed # Besides of the f90 files written at MPIE, the two library files of fftw3 "libfftw3_threads.a" "libfftw3.a" are also needed
# Install fftw3 (v3.3 is tested) with "./configure --enable-threads --enable-sse2" and "make"; "make install" is not needed # Install fftw3 (v3.3 is tested) with "./configure --enable-threads --enable-sse2" and "make"; "make install" is not needed
# as long as the two library files "libfftw3_threads.a" "libfftw3.a" are copied to the code/include directory. # as long as the two library files "libfftw3_threads.a" "libfftw3.a" are copied to the code/include directory.
# Need the AMD Core Math Library to be installed (v 4.4 is tested)
########################################################################################
# OPTIONS = standard (alternative): meaning # OPTIONS = standard (alternative): meaning
#------------------------------------------------------------- #-------------------------------------------------------------
# PRECISION = double (single): floating point precision # PRECISION = double (single): floating point precision
# F90 = ifort (gfortran): compiler, choose Intel or GNU # F90 = ifort (gfortran): compiler, choose Intel or GNU
# PORTABLE = TRUE (FALSE): decision, if executable is optimized for the machine on which it was built. Until now only for ifort # PORTABLE = TRUE (FALSE): decision, if executable is optimized for the machine on which it was built.
# OPTIMIZATION = DEFENSIVE (OFF,AGGRESSIVE,ULTRA): Optimization mode, O0, O2, O3 # OPTIMIZATION = DEFENSIVE (OFF,AGGRESSIVE,ULTRA): Optimization mode: O2, O0, O3 + further options for most files, 03 + further options for all files
# OPENMP = TRUE (FALSE): OpenMP multiprocessor support # OPENMP = TRUE (FALSE): OpenMP multiprocessor support
# PREFIX: specifie an arbitrary prefix # ACMLPATH =/opt/acml4.4.0/ifort64/lib (...) Path to ACML Library, choose according to your system
# SUFFIX: specife an arbitrary suffix, e.g # ACMLPATH =/opt/acml4.4.0/ifort64_mp/lib (...) Path to ACML Library with multicore support, choose according to your system
# FFTWOPTIONS =include/libfftw3.a include/libfftw3_threads.a -lpthread (...) Path to FFTW library files with Linux threads (multicore) support
# FFTWOPTIONS =include/libfftw3.a (...) Path to FFTW library files without Linux threads (multicore) support
# FFTWOPTIONS is different for single and double precision. Choose the options to use OpenMP instead of pthreads support or change the directory
# PREFIX: specify an arbitrary prefix
# SUFFIX: specify an arbitrary suffix
# COMPILERNAME = overwrite name of Compiler, e.g. using mpich-g90 instead of ifort # COMPILERNAME = overwrite name of Compiler, e.g. using mpich-g90 instead of ifort
########################################################################################
# Here are some usefull debugging switches. Switch on by uncommenting last line: # Here are some usefull debugging switches. Switch on by uncommenting the #SUFFIX line at the end of this section:
#--------------------------------------------------------------------------------
# information on http://software.intel.com/en-us/articles/determining-root-cause-of-sigsegv-or-sigbus-errors/ # information on http://software.intel.com/en-us/articles/determining-root-cause-of-sigsegv-or-sigbus-errors/
# check if an array index is too small (<1) or too large! # check if an array index is too small (<1) or too large!
DEBUG1 =-check bounds -g DEBUG1 =-check bounds -g
@ -32,56 +36,77 @@ DEBUG2 =-check arg_temp_created
DEBUG3 =-fp-stack-check -g -traceback -gen-interfaces -warn interfaces DEBUG3 =-fp-stack-check -g -traceback -gen-interfaces -warn interfaces
#should not be done for OpenMP, but set "ulimit -s unlimited" on shell. Problably it helps also to unlimit other limits #should not be done for OpenMP, but set "ulimit -s unlimited" on shell. Problably it helps also to unlimit other limits
DEBUG4 =-heap-arrays DEBUG4 =-heap-arrays
#checks for standard #checks for standard
DEBUG5 =stand std03/std95 DEBUG5 =stand std03/std95
#SUFFIX =$(DEBUG1) $(DEBUG2) $(DEBUG3) #SUFFIX =$(DEBUG1) $(DEBUG2) $(DEBUG3)
########################################################################################
#BLAS for OPENMP=OFF ifndef F90
BLAS_ifort =-L /opt/acml4.4.0/ifort64/lib -lacml
BLAS_gfortran =
ifeq ($(F90), )
F90 =ifort F90 =ifort
endif endif
ifndef OPTIMIZATION
ifeq ($(OPTIMIZATION), )
OPTIMIZATION =DEFENSIVE OPTIMIZATION =DEFENSIVE
endif endif
MAXOPTI =$(OPTIMIZATION) MAXOPTI =$(OPTIMIZATION)
ifeq ($(OPTIMIZATION),ULTRA)
MAXOPTI=AGGRESSIVE
endif
ifeq ($(OPTIMIZATION),AGGRESSIVE) ifeq ($(OPTIMIZATION),AGGRESSIVE)
MAXOPTI=DEFENSIVE MAXOPTI=DEFENSIVE
endif endif
ifeq ($(OPTIMIZATION),ULTRA)
MAXOPTI=AGGRESSIVE
OPTIMIZATION=AGGRESSIVE
endif
ifeq ($(PORTABLE),FALSE) ifeq ($(PORTABLE),FALSE)
PORTABLE_SWITCH =-msse3 PORTABLE_SWITCH =-msse3
endif endif
ifneq ($(OPENMP), OFF) ifndef OPENMP
OPENMP_FLAG_ifort =-openmp -openmp-report0 -parallel
OPENMP_FLAG_gfortran =-fopenmp
BLAS_ifort =-L /opt/acml4.4.0/ifort64_mp/lib -lacml_mp
BLAS_gfortran =
OPENMP=ON OPENMP=ON
endif endif
ifeq ($(OPENMP),ON)
OPENMP_FLAG_ifort =-openmp -openmp-report0 -parallel
OPENMP_FLAG_gfortran =-fopenmp
ifndef ACMLPATH
ACMLPATH =/opt/acml4.4.0/ifort64_mp/lib
endif
ifndef FFTWOPTIONS
ifeq ($(PRECISION),single)
FFTWOPTIONS =include/libfftw3f_threads.a include/libfftw3f.a -lpthread
else
FFTWOPTIONS =include/libfftw3_threads.a include/libfftw3.a -lpthread
endif
endif
BLAS_ifort =-L $(ACMLPATH) -lacml_mp
BLAS_gfortran =
else
ifndef ACMLPATH
ACMLPATH =/opt/acml4.4.0/ifort64/lib
endif
ifndef FFTWOPTIONS
ifeq ($(PRECISION),single)
FFTWOPTIONS =include/libfftw3f.a
else
FFTWOPTIONS =include/libfftw3.a
endif
endif
BLAS_ifort =-L $(ACMLPATH) -lacml
BLAS_gfortran =
endif
OPTIMIZATION_OFF_ifort =-O0 OPTIMIZATION_OFF_ifort =-O0
OPTIMIZATION_OFF_gfortran =-O0 OPTIMIZATION_OFF_gfortran =-O0
OPTIMIZATION_DEFENSIVE_ifort =-O2 OPTIMIZATION_DEFENSIVE_ifort =-O2
OPTIMIZATION_DEFENSIVE_gfortran =-O2 OPTIMIZATION_DEFENSIVE_gfortran =-O2
OPTIMIZATION_AGGRESSIVE_ifort =-O3 $(PORTABLE_SWITCH) -ip -static -fp-model fast=2 -no-prec-div OPTIMIZATION_AGGRESSIVE_ifort =-O3 $(PORTABLE_SWITCH) -ip -static -fp-model fast=2 -no-prec-div
OPTIMIZATION_ULTRA_ifort =-O3 $(PORTABLE_SWITCH) -ip -static -fp-model fast=2 -no-prec-div OPTIMIZATION_AGGRESSIVE_gfortran =-O3 $(PORTABLE_SWITCH) -march=opteron -ffast-math -funroll-loops -ftree-vectorize -ftree-loop-linear
OPTIMIZATION_AGGRESSIVE_gfortran =-O3 -march=opteron -ffast-math -funroll-loops -ftree-vectorize -ftree-loop-linear $(PORTABLE_SWITCH)
COMPILE_OPTIONS_ifort =-fpp -diag-disable 8291,8290 COMPILE_OPTIONS_ifort =-fpp -diag-disable 8291,8290
COMPILE_OPTIONS_gfortran =-xf95-cpp-input -ffree-line-length-none COMPILE_OPTIONS_gfortran =-xf95-cpp-input -ffree-line-length-none -fno-range-check
COMPILE =${OPENMP_FLAG_${F90}} ${COMPILE_OPTIONS_${F90}} ${OPTIMIZATION_${OPTIMIZATION}_${F90}} -c COMPILE =${OPENMP_FLAG_${F90}} ${COMPILE_OPTIONS_${F90}} ${OPTIMIZATION_${OPTIMIZATION}_${F90}} -c
COMPILE_MAXOPTI =${OPENMP_FLAG_${F90}} ${COMPILE_OPTIONS_${F90}} ${OPTIMIZATION_${MAXOPTI}_${F90}} -c COMPILE_MAXOPTI =${OPENMP_FLAG_${F90}} ${COMPILE_OPTIONS_${F90}} ${OPTIMIZATION_${MAXOPTI}_${F90}} -c
@ -92,14 +117,14 @@ endif
ifeq ($(PRECISION),single) ifeq ($(PRECISION),single)
DAMASK_spectral_single.exe: DAMASK_spectral_single.o CPFEM.a DAMASK_spectral_single.exe: DAMASK_spectral_single.o CPFEM.a
$(PREFIX) $(COMPILERNAME) ${OPENMP_FLAG_${F90}} -o DAMASK_spectral_single.exe DAMASK_spectral_single.o CPFEM.a include/libfftw3f_threads.a include/libfftw3f.a\ $(PREFIX) $(COMPILERNAME) ${OPENMP_FLAG_${F90}} -o DAMASK_spectral_single.exe DAMASK_spectral_single.o CPFEM.a $(FFTWOPTIONS)\
constitutive.a advanced.a basics.a -lpthread ${BLAS_${F90}} constitutive.a advanced.a basics.a ${BLAS_${F90}}
DAMASK_spectral_single.o: DAMASK_spectral_single.f90 CPFEM.o DAMASK_spectral_single.o: DAMASK_spectral_single.f90 CPFEM.o
$(PREFIX) $(COMPILERNAME) $(COMPILE_MAXOPTI) DAMASK_spectral_single.f90 $(SUFFIX) $(PREFIX) $(COMPILERNAME) $(COMPILE_MAXOPTI) DAMASK_spectral_single.f90 $(SUFFIX)
else else
DAMASK_spectral.exe: DAMASK_spectral.o CPFEM.a DAMASK_spectral.exe: DAMASK_spectral.o CPFEM.a
$(PREFIX) $(COMPILERNAME) ${OPENMP_FLAG_${F90}} -o DAMASK_spectral.exe DAMASK_spectral.o CPFEM.a include/libfftw3_threads.a include/libfftw3.a\ $(PREFIX) $(COMPILERNAME) ${OPENMP_FLAG_${F90}} -o DAMASK_spectral.exe DAMASK_spectral.o CPFEM.a $(FFTWOPTIONS)\
constitutive.a advanced.a basics.a -lpthread ${BLAS_${F90}} constitutive.a advanced.a basics.a ${BLAS_${F90}}
DAMASK_spectral.o: DAMASK_spectral.f90 CPFEM.o DAMASK_spectral.o: DAMASK_spectral.f90 CPFEM.o
$(PREFIX) $(COMPILERNAME) $(COMPILE_MAXOPTI) DAMASK_spectral.f90 $(SUFFIX) $(PREFIX) $(COMPILERNAME) $(COMPILE_MAXOPTI) DAMASK_spectral.f90 $(SUFFIX)
endif endif
@ -168,7 +193,6 @@ debug.o: debug.f90 numerics.o
$(PREFIX) $(COMPILERNAME) $(COMPILE) debug.f90 $(SUFFIX) $(PREFIX) $(COMPILERNAME) $(COMPILE) debug.f90 $(SUFFIX)
math.o: math.f90 numerics.o math.o: math.f90 numerics.o
$(PREFIX) $(COMPILERNAME) $(COMPILE) math.f90 $(SUFFIX) $(PREFIX) $(COMPILERNAME) $(COMPILE) math.f90 $(SUFFIX)
numerics.o: numerics.f90 IO.o numerics.o: numerics.f90 IO.o
$(PREFIX) $(COMPILERNAME) $(COMPILE) numerics.f90 $(SUFFIX) $(PREFIX) $(COMPILERNAME) $(COMPILE) numerics.f90 $(SUFFIX)
IO.o: IO.f90 DAMASK_spectral_interface.o IO.o: IO.f90 DAMASK_spectral_interface.o
@ -183,8 +207,6 @@ else
DAMASK_spectral_interface.o: DAMASK_spectral_interface.f90 prec.o DAMASK_spectral_interface.o: DAMASK_spectral_interface.f90 prec.o
$(PREFIX) $(COMPILERNAME) $(COMPILE) DAMASK_spectral_interface.f90 $(SUFFIX) $(PREFIX) $(COMPILERNAME) $(COMPILE) DAMASK_spectral_interface.f90 $(SUFFIX)
prec.o: prec.f90 prec.o: prec.f90
@echo $(OPTIMIZATION)
@echo $(MAXOPTI)
$(PREFIX) $(COMPILERNAME) $(COMPILE) prec.f90 $(SUFFIX) $(PREFIX) $(COMPILERNAME) $(COMPILE) prec.f90 $(SUFFIX)
endif endif

21
set_python_env.py Normal file
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@ -0,0 +1,21 @@
#!/usr/bin/env python
import os,site,sys
# More elegant was to determine DAMASK install dir?
#p=os.path.abspath(__file__)
#l=p.split('/')
#p=p[:-len(l[-1])]
#print p
#site.addsitedir(p) # adds the paths in the *.pth file to the python search path
basepath=os.path.expanduser('~')+'/DAMASK/'
sys.path.insert(0,basepath+'processing')
sys.path.insert(0,basepath+'processing/post')
sys.path.insert(0,basepath+'processing/pre')
sys.path.insert(0,basepath+'processing/setup')
#print sys.path