Merge branch 'development' into polishing-for-release
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commit
0e3462f3e0
2
PRIVATE
2
PRIVATE
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@ -1 +1 @@
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Subproject commit 1d0c95c5c1c0e7e6f57bdfc94b695e47a6ad6c60
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Subproject commit b1a31a79cc90d458494068a96cfd3e9497aa330c
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@ -83,6 +83,7 @@ subroutine discretization_mesh_init(restart)
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num_mesh
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integer :: integrationOrder !< order of quadrature rule required
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print'(/,a)', ' <<<+- discretization_mesh init -+>>>'
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!--------------------------------------------------------------------------------
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@ -95,13 +96,15 @@ subroutine discretization_mesh_init(restart)
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debug_element = config_debug%get_asInt('element',defaultVal=1)
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debug_ip = config_debug%get_asInt('integrationpoint',defaultVal=1)
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call DMPlexCreateFromFile(PETSC_COMM_WORLD,interface_geomFile,PETSC_TRUE,globalMesh,ierr)
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CHKERRQ(ierr)
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call DMGetDimension(globalMesh,dimPlex,ierr)
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CHKERRQ(ierr)
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call DMGetStratumSize(globalMesh,'depth',dimPlex,mesh_NcpElemsGlobal,ierr)
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CHKERRQ(ierr)
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call DMView(globalMesh, PETSC_VIEWER_STDOUT_WORLD,ierr)
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CHKERRQ(ierr)
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! get number of IDs in face sets (for boundary conditions?)
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call DMGetLabelSize(globalMesh,'Face Sets',mesh_Nboundaries,ierr)
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CHKERRQ(ierr)
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@ -109,6 +112,13 @@ subroutine discretization_mesh_init(restart)
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call MPI_Bcast(mesh_NcpElemsGlobal,1,MPI_INTEGER,0,PETSC_COMM_WORLD,ierr)
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call MPI_Bcast(dimPlex,1,MPI_INTEGER,0,PETSC_COMM_WORLD,ierr)
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if (worldrank == 0) then
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call DMClone(globalMesh,geomMesh,ierr)
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else
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call DMPlexDistribute(globalMesh,0,sf,geomMesh,ierr)
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endif
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CHKERRQ(ierr)
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allocate(mesh_boundaries(mesh_Nboundaries), source = 0)
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call DMGetLabelSize(globalMesh,'Face Sets',nFaceSets,ierr)
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CHKERRQ(ierr)
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@ -123,35 +133,6 @@ subroutine discretization_mesh_init(restart)
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endif
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call MPI_Bcast(mesh_boundaries,mesh_Nboundaries,MPI_INTEGER,0,PETSC_COMM_WORLD,ierr)
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if (worldrank == 0) then
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fileContent = IO_readlines(interface_geomFile)
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l = 0
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do
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l = l + 1
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if (IO_isBlank(fileContent(l))) cycle ! need also to ignore C and C++ style comments?
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if (trim(fileContent(l)) == '$Elements') then
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j = 0
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l = l + 1
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do
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l = l + 1
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if (trim(fileContent(l)) == '$EndElements') exit
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chunkPos = IO_stringPos(fileContent(l))
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if (chunkPos(1) == 3+IO_intValue(fileContent(l),chunkPos,3)+dimPlex+1) then
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call DMSetLabelValue(globalMesh,'material',j,IO_intValue(fileContent(l),chunkPos,4),ierr)
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CHKERRQ(ierr)
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j = j + 1
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endif
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enddo
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exit
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endif
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enddo
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call DMClone(globalMesh,geomMesh,ierr)
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CHKERRQ(ierr)
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else
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call DMPlexDistribute(globalMesh,0,sf,geomMesh,ierr)
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CHKERRQ(ierr)
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endif
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call DMDestroy(globalMesh,ierr); CHKERRQ(ierr)
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call DMGetStratumSize(geomMesh,'depth',dimPlex,mesh_NcpElems,ierr)
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@ -166,9 +147,10 @@ subroutine discretization_mesh_init(restart)
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allocate(materialAt(mesh_NcpElems))
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do j = 1, mesh_NcpElems
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call DMGetLabelValue(geomMesh,'material',j-1,materialAt(j),ierr)
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call DMGetLabelValue(geomMesh,'Cell Sets',j-1,materialAt(j),ierr)
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CHKERRQ(ierr)
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end do
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materialAt = materialAt + 1
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if (debug_element < 1 .or. debug_element > mesh_NcpElems) call IO_error(602,ext_msg='element')
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if (debug_ip < 1 .or. debug_ip > mesh_maxNips) call IO_error(602,ext_msg='IP')
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