parent
57180952ec
commit
06d11a72da
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@ -50,7 +50,8 @@ for name in filenames:
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for l in [options.quaternion,options.phase,options.microstructure]:
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for l in [options.quaternion,options.phase,options.microstructure]:
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if l is not None: labels.append(l)
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if l is not None: labels.append(l)
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geom = damask.Geom.load_table(name,options.pos,labels)
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t = damask.Table.load(name)
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geom = damask.Geom.from_table(t,options.pos,labels)
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damask.util.croak(geom)
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damask.util.croak(geom)
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geom.save_ASCII(sys.stdout if name is None else os.path.splitext(name)[0]+'.geom',compress=False)
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geom.save_ASCII(sys.stdout if name is None else os.path.splitext(name)[0]+'.geom',compress=False)
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@ -6,7 +6,6 @@ from . import grid_filters
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from . import Config
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from . import Config
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from . import Lattice
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from . import Lattice
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from . import Rotation
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from . import Rotation
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from . import Table
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class ConfigMaterial(Config):
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class ConfigMaterial(Config):
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"""Material configuration."""
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"""Material configuration."""
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@ -27,13 +26,13 @@ class ConfigMaterial(Config):
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@staticmethod
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@staticmethod
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def load_table(fname,coordinates=None,constituents={},**kwargs):
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def from_table(table,coordinates=None,constituents={},**kwargs):
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"""
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"""
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Load from an ASCII table.
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Load from an ASCII table.
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Parameters
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Parameters
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----------
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----------
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fname : str, file handle, or damask.Table
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table : damask.Table
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Table that contains material information.
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Table that contains material information.
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coordinates : str, optional
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coordinates : str, optional
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Label of spatial coordiates. Used for sorting and performing a
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Label of spatial coordiates. Used for sorting and performing a
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@ -50,11 +49,12 @@ class ConfigMaterial(Config):
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--------
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--------
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>>> import damask
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>>> import damask
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>>> import damask.ConfigMaterial as cm
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>>> import damask.ConfigMaterial as cm
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>>> damask.Table.load('small.txt')
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>>> t = damask.Table.load('small.txt')
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>>> t
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pos pos pos qu qu qu qu phase homog
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pos pos pos qu qu qu qu phase homog
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0 0 0 0 0.19 0.8 0.24 -0.51 Aluminum SX
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0 0 0 0 0.19 0.8 0.24 -0.51 Aluminum SX
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1 1 0 0 0.8 0.19 0.24 -0.51 Steel SX
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1 1 0 0 0.8 0.19 0.24 -0.51 Steel SX
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>>> cm.load_table('small.txt','pos',{'O':'qu','phase':'phase'},homogenization='homog')
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>>> cm.from_table(t,'pos',{'O':'qu','phase':'phase'},homogenization='homog')
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material:
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material:
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- constituents:
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- constituents:
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- O: [0.19, 0.8, 0.24, -0.51]
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- O: [0.19, 0.8, 0.24, -0.51]
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@ -68,10 +68,12 @@ class ConfigMaterial(Config):
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homogenization: SX
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homogenization: SX
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"""
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"""
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t = Table.load(fname)
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if coordinates is not None:
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if coordinates is not None:
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t = t.sort_by([f'{i}_{coordinates}' for i in range(3,0,-1)])
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t = table.sort_by([f'{i}_{coordinates}' for i in range(3,0,-1)])
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grid_filters.coord0_check(t.get(coordinates))
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grid_filters.coord0_check(t.get(coordinates))
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else:
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t = table
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constituents_ = {k:t.get(v) for k,v in constituents.items()}
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constituents_ = {k:t.get(v) for k,v in constituents.items()}
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kwargs_ = {k:t.get(v) for k,v in kwargs.items()}
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kwargs_ = {k:t.get(v) for k,v in kwargs.items()}
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@ -256,7 +258,7 @@ class ConfigMaterial(Config):
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fraction: 1.0
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fraction: 1.0
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phase: Aluminum
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phase: Aluminum
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homogenization: SX
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homogenization: SX
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"""
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"""
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c = [{'constituents':u} for u in ConfigMaterial._constituents(**constituents)]
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c = [{'constituents':u} for u in ConfigMaterial._constituents(**constituents)]
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for k,v in kwargs.items():
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for k,v in kwargs.items():
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@ -11,7 +11,6 @@ from . import environment
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from . import VTK
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from . import VTK
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from . import util
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from . import util
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from . import grid_filters
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from . import grid_filters
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from . import Table
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from . import Rotation
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from . import Rotation
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@ -246,14 +245,14 @@ class Geom:
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@staticmethod
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@staticmethod
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def load_table(fname,coordinates,labels):
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def from_table(table,coordinates,labels):
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"""
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"""
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Load an ASCII table.
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Load an ASCII table.
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Parameters
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Parameters
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----------
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----------
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fname : str, file handle, or damask.Table
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table : damask.Table
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Table that contains geometry information.
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Table that contains material information.
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coordinates : str
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coordinates : str
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Label of the column containing the spatial coordinates.
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Label of the column containing the spatial coordinates.
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labels : str or list of str
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labels : str or list of str
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@ -261,16 +260,15 @@ class Geom:
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Each unique combintation of values results in a material.
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Each unique combintation of values results in a material.
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"""
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"""
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table = (fname if isinstance(fname,Table) else Table.load(fname)). \
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t = table.sort_by([f'{i}_{coordinates}' for i in range(3,0,-1)])
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sort_by([f'{i}_{coordinates}' for i in range(3,0,-1)])
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grid,size,origin = grid_filters.cell_coord0_gridSizeOrigin(table.get(coordinates))
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grid,size,origin = grid_filters.cell_coord0_gridSizeOrigin(t.get(coordinates))
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labels_ = [labels] if isinstance(labels,str) else labels
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labels_ = [labels] if isinstance(labels,str) else labels
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_,unique_inverse = np.unique(np.hstack([table.get(l) for l in labels_]),return_inverse=True,axis=0)
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_,unique_inverse = np.unique(np.hstack([t.get(l) for l in labels_]),return_inverse=True,axis=0)
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ma = unique_inverse.reshape(grid,order='F') + 1
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ma = unique_inverse.reshape(grid,order='F') + 1
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return Geom(ma,size,origin,util.execution_stamp('Geom','load_table'))
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return Geom(ma,size,origin,util.execution_stamp('Geom','from_table'))
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@staticmethod
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@staticmethod
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