DAMASK_EICMD/python/tests/test_Rotation.py

318 lines
15 KiB
Python
Raw Normal View History

import os
2019-11-24 10:59:00 +05:30
import pytest
2019-11-22 01:31:01 +05:30
import numpy as np
2019-11-24 10:59:00 +05:30
2019-11-22 01:31:01 +05:30
from damask import Rotation
import rotation_conversion
2020-04-08 17:11:46 +05:30
2020-04-09 11:10:20 +05:30
n = 1100
atol=1.e-4
scatter=1.e-2
2019-11-24 10:59:00 +05:30
@pytest.fixture
def default():
"""A set of n random rotations."""
specials = np.array(
[np.array([ 1.0, 0.0, 0.0, 0.0]),
2020-04-08 17:11:46 +05:30
#-----------------------------------------------
np.array([0.0, 1.0, 0.0, 0.0]),
np.array([0.0, 0.0, 1.0, 0.0]),
np.array([0.0, 0.0, 0.0, 1.0]),
np.array([0.0,-1.0, 0.0, 0.0]),
np.array([0.0, 0.0,-1.0, 0.0]),
np.array([0.0, 0.0, 0.0,-1.0]),
2020-04-08 17:11:46 +05:30
#-----------------------------------------------
np.array([1.0, 1.0, 0.0, 0.0])/np.sqrt(2.),
np.array([1.0, 0.0, 1.0, 0.0])/np.sqrt(2.),
np.array([1.0, 0.0, 0.0, 1.0])/np.sqrt(2.),
np.array([0.0, 1.0, 1.0, 0.0])/np.sqrt(2.),
np.array([0.0, 1.0, 0.0, 1.0])/np.sqrt(2.),
np.array([0.0, 0.0, 1.0, 1.0])/np.sqrt(2.),
2020-04-08 17:11:46 +05:30
#-----------------------------------------------
np.array([1.0,-1.0, 0.0, 0.0])/np.sqrt(2.),
np.array([1.0, 0.0,-1.0, 0.0])/np.sqrt(2.),
np.array([1.0, 0.0, 0.0,-1.0])/np.sqrt(2.),
np.array([0.0, 1.0,-1.0, 0.0])/np.sqrt(2.),
np.array([0.0, 1.0, 0.0,-1.0])/np.sqrt(2.),
np.array([0.0, 0.0, 1.0,-1.0])/np.sqrt(2.),
2020-04-08 17:11:46 +05:30
#-----------------------------------------------
np.array([0.0, 1.0,-1.0, 0.0])/np.sqrt(2.),
np.array([0.0, 1.0, 0.0,-1.0])/np.sqrt(2.),
np.array([0.0, 0.0, 1.0,-1.0])/np.sqrt(2.),
2020-04-08 17:11:46 +05:30
#-----------------------------------------------
np.array([0.0,-1.0,-1.0, 0.0])/np.sqrt(2.),
np.array([0.0,-1.0, 0.0,-1.0])/np.sqrt(2.),
np.array([0.0, 0.0,-1.0,-1.0])/np.sqrt(2.),
#-----------------------------------------------
np.array([1.0, 1.0, 1.0, 0.0])/np.sqrt(3.),
np.array([1.0, 1.0, 0.0, 1.0])/np.sqrt(3.),
np.array([1.0, 0.0, 1.0, 1.0])/np.sqrt(3.),
np.array([1.0,-1.0, 1.0, 0.0])/np.sqrt(3.),
np.array([1.0,-1.0, 0.0, 1.0])/np.sqrt(3.),
np.array([1.0, 0.0,-1.0, 1.0])/np.sqrt(3.),
np.array([1.0, 1.0,-1.0, 0.0])/np.sqrt(3.),
np.array([1.0, 1.0, 0.0,-1.0])/np.sqrt(3.),
np.array([1.0, 0.0, 1.0,-1.0])/np.sqrt(3.),
np.array([1.0,-1.0,-1.0, 0.0])/np.sqrt(3.),
np.array([1.0,-1.0, 0.0,-1.0])/np.sqrt(3.),
np.array([1.0, 0.0,-1.0,-1.0])/np.sqrt(3.),
#-----------------------------------------------
np.array([0.0, 1.0, 1.0, 1.0])/np.sqrt(3.),
np.array([0.0, 1.0,-1.0, 1.0])/np.sqrt(3.),
np.array([0.0, 1.0, 1.0,-1.0])/np.sqrt(3.),
np.array([0.0,-1.0, 1.0, 1.0])/np.sqrt(3.),
np.array([0.0,-1.0,-1.0, 1.0])/np.sqrt(3.),
np.array([0.0,-1.0, 1.0,-1.0])/np.sqrt(3.),
np.array([0.0,-1.0,-1.0,-1.0])/np.sqrt(3.),
#-----------------------------------------------
np.array([1.0, 1.0, 1.0, 1.0])/2.,
np.array([1.0,-1.0, 1.0, 1.0])/2.,
np.array([1.0, 1.0,-1.0, 1.0])/2.,
np.array([1.0, 1.0, 1.0,-1.0])/2.,
np.array([1.0,-1.0,-1.0, 1.0])/2.,
np.array([1.0,-1.0, 1.0,-1.0])/2.,
np.array([1.0, 1.0,-1.0,-1.0])/2.,
np.array([1.0,-1.0,-1.0,-1.0])/2.,
])
2020-04-09 11:10:20 +05:30
specials_scatter = specials + np.broadcast_to(np.random.rand(4)*scatter,specials.shape)
specials_scatter /= np.linalg.norm(specials_scatter,axis=1).reshape(-1,1)
specials_scatter[specials_scatter[:,0]<0]*=-1
2020-05-03 22:21:30 +05:30
return [Rotation.from_quaternion(s) for s in specials] + \
[Rotation.from_quaternion(s) for s in specials_scatter] + \
[Rotation.from_random() for _ in range(n-len(specials)-len(specials_scatter))]
2019-11-24 10:59:00 +05:30
@pytest.fixture
def reference_dir(reference_dir_base):
"""Directory containing reference results."""
return os.path.join(reference_dir_base,'Rotation')
2019-11-22 01:31:01 +05:30
class TestRotation:
2019-11-24 10:59:00 +05:30
def test_Eulers(self,default):
for rot in default:
2020-05-03 22:21:30 +05:30
m = rot.as_quaternion()
o = Rotation.from_Eulers(rot.as_Eulers()).as_quaternion()
ok = np.allclose(m,o,atol=atol)
2020-05-03 22:21:30 +05:30
if np.isclose(rot.as_quaternion()[0],0.0,atol=atol):
ok = ok or np.allclose(m*-1.,o,atol=atol)
2020-05-03 22:21:30 +05:30
print(m,o,rot.as_quaternion())
assert ok and np.isclose(np.linalg.norm(o),1.0)
2019-11-22 01:31:01 +05:30
2019-11-24 10:59:00 +05:30
def test_AxisAngle(self,default):
for rot in default:
2020-05-03 22:21:30 +05:30
m = rot.as_Eulers()
o = Rotation.from_axis_angle(rot.as_axis_angle()).as_Eulers()
u = np.array([np.pi*2,np.pi,np.pi*2])
ok = np.allclose(m,o,atol=atol)
ok = ok or np.allclose(np.where(np.isclose(m,u),m-u,m),np.where(np.isclose(o,u),o-u,o),atol=atol)
if np.isclose(m[1],0.0,atol=atol) or np.isclose(m[1],np.pi,atol=atol):
sum_phi = np.unwrap([m[0]+m[2],o[0]+o[2]])
ok = ok or np.isclose(sum_phi[0],sum_phi[1],atol=atol)
2020-05-03 22:21:30 +05:30
print(m,o,rot.as_quaternion())
assert ok and (np.zeros(3)-1.e-9 <= o).all() and (o <= np.array([np.pi*2.,np.pi,np.pi*2.])+1.e-9).all()
2019-11-22 01:31:01 +05:30
2019-11-24 10:59:00 +05:30
def test_Matrix(self,default):
for rot in default:
2020-05-03 22:21:30 +05:30
m = rot.as_axis_angle()
o = Rotation.from_axis_angle(rot.as_axis_angle()).as_axis_angle()
ok = np.allclose(m,o,atol=atol)
if np.isclose(m[3],np.pi,atol=atol):
ok = ok or np.allclose(m*np.array([-1.,-1.,-1.,1.]),o,atol=atol)
2020-05-03 22:21:30 +05:30
print(m,o,rot.as_quaternion())
assert ok and np.isclose(np.linalg.norm(o[:3]),1.0) and o[3]<=np.pi++1.e-9
2019-11-22 01:31:01 +05:30
2020-04-11 17:27:05 +05:30
def test_Rodrigues(self,default):
2019-11-24 10:59:00 +05:30
for rot in default:
2020-05-03 22:21:30 +05:30
m = rot.as_matrix()
o = Rotation.from_Rodrigues(rot.as_Rodrigues()).as_matrix()
ok = np.allclose(m,o,atol=atol)
print(m,o)
assert ok and np.isclose(np.linalg.det(o),1.0)
2019-11-22 01:31:01 +05:30
2019-11-24 10:59:00 +05:30
def test_Homochoric(self,default):
cutoff = np.tan(np.pi*.5*(1.-1e-4))
2019-11-24 10:59:00 +05:30
for rot in default:
2020-05-03 22:21:30 +05:30
m = rot.as_Rodrigues()
o = Rotation.from_homochoric(rot.as_homochoric()).as_Rodrigues()
ok = np.allclose(np.clip(m,None,cutoff),np.clip(o,None,cutoff),atol=atol)
ok = ok or np.isclose(m[3],0.0,atol=atol)
2020-05-03 22:21:30 +05:30
print(m,o,rot.as_quaternion())
assert ok and np.isclose(np.linalg.norm(o[:3]),1.0)
2019-11-22 01:31:01 +05:30
2019-11-24 10:59:00 +05:30
def test_Cubochoric(self,default):
for rot in default:
2020-05-03 22:21:30 +05:30
m = rot.as_homochoric()
o = Rotation.from_cubochoric(rot.as_cubochoric()).as_homochoric()
ok = np.allclose(m,o,atol=atol)
2020-05-03 22:21:30 +05:30
print(m,o,rot.as_quaternion())
assert ok and np.linalg.norm(o) < (3.*np.pi/4.)**(1./3.) + 1.e-9
2019-11-22 01:31:01 +05:30
2019-11-24 10:59:00 +05:30
def test_Quaternion(self,default):
for rot in default:
2020-05-03 22:21:30 +05:30
m = rot.as_cubochoric()
o = Rotation.from_quaternion(rot.as_quaternion()).as_cubochoric()
ok = np.allclose(m,o,atol=atol)
2020-05-03 22:21:30 +05:30
print(m,o,rot.as_quaternion())
assert ok and o.max() < np.pi**(2./3.)*0.5+1.e-9
2020-04-21 16:52:55 +05:30
@pytest.mark.parametrize('function',[Rotation.from_quaternion,
Rotation.from_Eulers,
Rotation.from_axis_angle,
Rotation.from_matrix,
Rotation.from_Rodrigues,
Rotation.from_homochoric])
def test_invalid_shape(self,function):
invalid_shape = np.random.random(np.random.randint(8,32,(3)))
with pytest.raises(ValueError):
function(invalid_shape)
2020-04-16 02:30:00 +05:30
@pytest.mark.parametrize('function,invalid',[(Rotation.from_quaternion, np.array([-1,0,0,0])),
(Rotation.from_quaternion, np.array([1,1,1,0])),
(Rotation.from_Eulers, np.array([1,4,0])),
(Rotation.from_axis_angle, np.array([1,0,0,4])),
(Rotation.from_axis_angle, np.array([1,1,0,1])),
(Rotation.from_matrix, np.random.rand(3,3)),
(Rotation.from_Rodrigues, np.array([1,0,0,-1])),
(Rotation.from_Rodrigues, np.array([1,1,0,1])),
(Rotation.from_homochoric, np.array([2,2,2])) ])
2020-05-16 17:14:07 +05:30
def test_invalid_value(self,function,invalid):
2020-04-16 02:30:00 +05:30
with pytest.raises(ValueError):
function(invalid)
@pytest.mark.parametrize('vectorized, single',[(Rotation.qu2om,rotation_conversion.qu2om),
(Rotation.qu2eu,rotation_conversion.qu2eu),
(Rotation.qu2ax,rotation_conversion.qu2ax),
(Rotation.qu2ro,rotation_conversion.qu2ro),
(Rotation.qu2ho,rotation_conversion.qu2ho)])
def test_quaternion_vectorization(self,default,vectorized,single):
2020-05-03 22:21:30 +05:30
qu = np.array([rot.as_quaternion() for rot in default])
vectorized(qu.reshape(qu.shape[0]//2,-1,4))
co = vectorized(qu)
for q,c in zip(qu,co):
2020-04-12 00:12:46 +05:30
print(q,c)
assert np.allclose(single(q),c) and np.allclose(single(q),vectorized(q))
2020-05-18 22:11:48 +05:30
@pytest.mark.parametrize('vectorized, single',[(Rotation.om2qu,rotation_conversion.om2qu),
(Rotation.om2eu,rotation_conversion.om2eu),
(Rotation.om2ax,rotation_conversion.om2ax)])
def test_matrix_vectorization(self,default,vectorized,single):
2020-05-03 22:21:30 +05:30
om = np.array([rot.as_matrix() for rot in default])
vectorized(om.reshape(om.shape[0]//2,-1,3,3))
co = vectorized(om)
2020-04-09 17:50:43 +05:30
for o,c in zip(om,co):
print(o,c)
assert np.allclose(single(o),c) and np.allclose(single(o),vectorized(o))
@pytest.mark.parametrize('vectorized, single',[(Rotation.eu2qu,rotation_conversion.eu2qu),
(Rotation.eu2om,rotation_conversion.eu2om),
(Rotation.eu2ax,rotation_conversion.eu2ax),
(Rotation.eu2ro,rotation_conversion.eu2ro)])
def test_Euler_vectorization(self,default,vectorized,single):
2020-05-03 22:21:30 +05:30
eu = np.array([rot.as_Eulers() for rot in default])
vectorized(eu.reshape(eu.shape[0]//2,-1,3))
co = vectorized(eu)
2020-04-09 17:50:43 +05:30
for e,c in zip(eu,co):
print(e,c)
assert np.allclose(single(e),c) and np.allclose(single(e),vectorized(e))
@pytest.mark.parametrize('vectorized, single',[(Rotation.ax2qu,rotation_conversion.ax2qu),
(Rotation.ax2om,rotation_conversion.ax2om),
(Rotation.ax2ro,rotation_conversion.ax2ro),
(Rotation.ax2ho,rotation_conversion.ax2ho)])
def test_axisAngle_vectorization(self,default,vectorized,single):
2020-05-03 22:21:30 +05:30
ax = np.array([rot.as_axis_angle() for rot in default])
vectorized(ax.reshape(ax.shape[0]//2,-1,4))
co = vectorized(ax)
for a,c in zip(ax,co):
2020-04-09 17:50:43 +05:30
print(a,c)
assert np.allclose(single(a),c) and np.allclose(single(a),vectorized(a))
2020-04-11 17:27:05 +05:30
@pytest.mark.parametrize('vectorized, single',[(Rotation.ro2ax,rotation_conversion.ro2ax),
(Rotation.ro2ho,rotation_conversion.ro2ho)])
def test_Rodrigues_vectorization(self,default,vectorized,single):
2020-05-03 22:21:30 +05:30
ro = np.array([rot.as_Rodrigues() for rot in default])
vectorized(ro.reshape(ro.shape[0]//2,-1,4))
co = vectorized(ro)
2020-04-11 17:27:05 +05:30
for r,c in zip(ro,co):
print(r,c)
assert np.allclose(single(r),c) and np.allclose(single(r),vectorized(r))
2020-04-11 19:44:40 +05:30
@pytest.mark.parametrize('vectorized, single',[(Rotation.ho2ax,rotation_conversion.ho2ax),
(Rotation.ho2cu,rotation_conversion.ho2cu)])
def test_homochoric_vectorization(self,default,vectorized,single):
2020-05-03 22:21:30 +05:30
ho = np.array([rot.as_homochoric() for rot in default])
vectorized(ho.reshape(ho.shape[0]//2,-1,3))
co = vectorized(ho)
2020-04-11 19:44:40 +05:30
for h,c in zip(ho,co):
print(h,c)
assert np.allclose(single(h),c) and np.allclose(single(h),vectorized(h))
2020-05-03 20:34:03 +05:30
@pytest.mark.parametrize('vectorized, single',[(Rotation.cu2ho,rotation_conversion.cu2ho)])
def test_cubochoric_vectorization(self,default,vectorized,single):
2020-05-03 22:21:30 +05:30
cu = np.array([rot.as_cubochoric() for rot in default])
vectorized(cu.reshape(cu.shape[0]//2,-1,3))
co = vectorized(cu)
2020-05-03 22:21:30 +05:30
for u,c in zip(cu,co):
print(u,c)
assert np.allclose(single(u),c) and np.allclose(single(u),vectorized(u))
2020-05-03 20:34:03 +05:30
@pytest.mark.parametrize('direction',['forward',
'backward'])
def test_pyramid_vectorization(self,direction):
p = np.random.rand(n,3)
2020-05-03 22:21:30 +05:30
o = Rotation._get_pyramid_order(p,direction)
2020-05-03 20:34:03 +05:30
for i,o_i in enumerate(o):
2020-05-03 22:21:30 +05:30
assert np.all(o_i==Rotation._get_pyramid_order(p[i],direction))
2020-05-03 20:34:03 +05:30
def test_pyramid_invariant(self):
a = np.random.rand(n,3)
2020-05-03 22:21:30 +05:30
f = Rotation._get_pyramid_order(a,'forward')
b = Rotation._get_pyramid_order(a,'backward')
2020-05-03 20:34:03 +05:30
assert np.all(np.take_along_axis(np.take_along_axis(a,f,-1),b,-1) == a)
2020-05-16 04:28:40 +05:30
2020-05-16 17:14:07 +05:30
@pytest.mark.parametrize('data',[np.random.rand(3),
np.random.rand(3,3),
np.random.rand(3,3,3,3)])
def test_rotate_identity(self,data):
2020-05-16 04:28:40 +05:30
R = Rotation()
2020-05-16 17:14:07 +05:30
assert np.allclose(data,R*data)
@pytest.mark.parametrize('data',[np.random.rand(3),
np.random.rand(3,3),
np.random.rand(3,3,3,3)])
def test_rotate_360deg(self,data):
phi_1 = np.random.random() * np.pi
phi_2 = 2*np.pi - phi_1
R_1 = Rotation.from_Eulers(np.array([phi_1,0.,0.]))
R_2 = Rotation.from_Eulers(np.array([0.,0.,phi_2]))
assert np.allclose(data,R_2*(R_1*data))
@pytest.mark.parametrize('data',[np.random.rand(3),
np.random.rand(3,3),
np.random.rand(3,3,3,3)])
def test_rotate_inverse(self,data):
R = Rotation.from_random()
assert np.allclose(data,R.inversed()*(R*data))
@pytest.mark.parametrize('data',[np.random.rand(4),
np.random.rand(3,2),
np.random.rand(3,2,3,3)])
def test_rotate_invalid_shape(self,data):
R = Rotation.from_random()
with pytest.raises(ValueError):
R*data
@pytest.mark.parametrize('data',['does_not_work',
(1,2),
5])
def test_rotate_invalid_type(self,data):
R = Rotation.from_random()
with pytest.raises(TypeError):
R*data