DAMASK_EICMD/python/tests/test_DADF5.py

import shutil
import os

import pytest
import numpy as np

from damask import DADF5
from damask import mechanics

@pytest.fixture
def default(tmp_path,reference_dir):
    """Small DADF5 file in temp location for modification."""
    fname = '12grains6x7x8_tensionY.hdf5'
    shutil.copy(os.path.join(reference_dir,fname),tmp_path)
    f = DADF5(os.path.join(tmp_path,fname))
    f.set_by_time(20.0,20.0)
    return f

@pytest.fixture
def reference_dir(reference_dir_base):
    """Directory containing reference results."""
    return os.path.join(reference_dir_base,'DADF5')


class TestDADF5:

    def test_time_increments(self,default):
        shape = default.read_dataset(default.get_dataset_location('F'),0).shape
        default.set_by_time(0.0,20.0)
        for i in default.iter_visible('increments'):
           assert shape == default.read_dataset(default.get_dataset_location('F'),0).shape


    def test_add_absolute(self,default):
        default.add_absolute('Fe')
        loc = {'Fe':   default.get_dataset_location('Fe'),
               '|Fe|': default.get_dataset_location('|Fe|')}
        in_memory = np.abs(default.read_dataset(loc['Fe'],0))
        in_file   = default.read_dataset(loc['|Fe|'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_calculation(self,default):
        default.add_calculation('x','2.0*np.abs(#F#)-1.0','-','my notes')
        loc = {'F':    default.get_dataset_location('F'),
               'x':    default.get_dataset_location('x')}
        in_memory = 2.0*np.abs(default.read_dataset(loc['F'],0))-1.0
        in_file   = default.read_dataset(loc['x'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_Cauchy(self,default):
        default.add_Cauchy('P','F')
        loc = {'F':    default.get_dataset_location('F'),
               'P':    default.get_dataset_location('P'),
               'sigma':default.get_dataset_location('sigma')}
        in_memory = mechanics.Cauchy(default.read_dataset(loc['P'],0),
                                     default.read_dataset(loc['F'],0))
        in_file   = default.read_dataset(loc['sigma'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_determinant(self,default):
        default.add_determinant('P')
        loc = {'P':     default.get_dataset_location('P'),
               'det(P)':default.get_dataset_location('det(P)')}
        in_memory = np.linalg.det(default.read_dataset(loc['P'],0)).reshape((-1,1))
        in_file   = default.read_dataset(loc['det(P)'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_deviator(self,default):
        default.add_deviator('P')
        loc = {'P'  :default.get_dataset_location('P'),
               's_P':default.get_dataset_location('s_P')}
        in_memory = mechanics.deviatoric_part(default.read_dataset(loc['P'],0))
        in_file   = default.read_dataset(loc['s_P'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_eigenvalues(self,default):
        default.add_Cauchy('P','F')
        default.add_eigenvalues('sigma')
        loc = {'sigma'        :default.get_dataset_location('sigma'),
               'lambda(sigma)':default.get_dataset_location('lambda(sigma)')}
        in_memory = mechanics.eigenvalues(default.read_dataset(loc['sigma'],0))
        in_file   = default.read_dataset(loc['lambda(sigma)'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_eigenvectors(self,default):
        default.add_Cauchy('P','F')
        default.add_eigenvectors('sigma')
        loc = {'sigma'   :default.get_dataset_location('sigma'),
               'v(sigma)':default.get_dataset_location('v(sigma)')}
        in_memory = mechanics.eigenvectors(default.read_dataset(loc['sigma'],0))
        in_file   = default.read_dataset(loc['v(sigma)'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_maximum_shear(self,default):
        default.add_Cauchy('P','F')
        default.add_maximum_shear('sigma')
        loc = {'sigma'           :default.get_dataset_location('sigma'),
               'max_shear(sigma)':default.get_dataset_location('max_shear(sigma)')}
        in_memory = mechanics.maximum_shear(default.read_dataset(loc['sigma'],0)).reshape(-1,1)
        in_file   = default.read_dataset(loc['max_shear(sigma)'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_Mises_strain(self,default):
        t = ['V','U'][np.random.randint(0,2)]
        m = np.random.random()*2.0 - 1.0
        default.add_strain_tensor('F',t,m)
        label = 'epsilon_{}^{}(F)'.format(t,m)
        default.add_Mises(label)
        loc = {label      :default.get_dataset_location(label),
               label+'_vM':default.get_dataset_location(label+'_vM')}
        in_memory = mechanics.Mises_strain(default.read_dataset(loc[label],0)).reshape(-1,1)
        in_file   = default.read_dataset(loc[label+'_vM'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_Mises_stress(self,default):
        default.add_Cauchy('P','F')
        default.add_Mises('sigma')
        loc = {'sigma'   :default.get_dataset_location('sigma'),
               'sigma_vM':default.get_dataset_location('sigma_vM')}
        in_memory = mechanics.Mises_stress(default.read_dataset(loc['sigma'],0)).reshape(-1,1)
        in_file   = default.read_dataset(loc['sigma_vM'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_norm(self,default):
        default.add_norm('F',1)
        loc = {'F':    default.get_dataset_location('F'),
               '|F|_1':default.get_dataset_location('|F|_1')}
        in_memory = np.linalg.norm(default.read_dataset(loc['F'],0),ord=1,axis=(1,2),keepdims=True)
        in_file   = default.read_dataset(loc['|F|_1'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_PK2(self,default):
        default.add_PK2('P','F')
        loc = {'F':default.get_dataset_location('F'),
               'P':default.get_dataset_location('P'),
               'S':default.get_dataset_location('S')}
        in_memory = mechanics.PK2(default.read_dataset(loc['P'],0),
                                  default.read_dataset(loc['F'],0))
        in_file   = default.read_dataset(loc['S'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_rotational_part(self,default):
        default.add_rotational_part('F')
        loc = {'F':    default.get_dataset_location('F'),
               'R(F)': default.get_dataset_location('R(F)')}
        in_memory = mechanics.rotational_part(default.read_dataset(loc['F'],0))
        in_file   = default.read_dataset(loc['R(F)'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_spherical(self,default):
        default.add_spherical('P')
        loc = {'P':   default.get_dataset_location('P'),
               'p_P': default.get_dataset_location('p_P')}
        in_memory = mechanics.spherical_part(default.read_dataset(loc['P'],0)).reshape(-1,1)
        in_file   = default.read_dataset(loc['p_P'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_strain(self,default):
        t = ['V','U'][np.random.randint(0,2)]
        m = np.random.random()*2.0 - 1.0
        default.add_strain_tensor('F',t,m)
        label = 'epsilon_{}^{}(F)'.format(t,m)
        loc = {'F':   default.get_dataset_location('F'),
               label: default.get_dataset_location(label)}
        in_memory = mechanics.strain_tensor(default.read_dataset(loc['F'],0),t,m)
        in_file   = default.read_dataset(loc[label],0)
        assert np.allclose(in_memory,in_file)

    def test_add_stretch_right(self,default):
        default.add_stretch_tensor('F','U')
        loc = {'F':    default.get_dataset_location('F'),
               'U(F)': default.get_dataset_location('U(F)')}
        in_memory = mechanics.right_stretch(default.read_dataset(loc['F'],0))
        in_file   = default.read_dataset(loc['U(F)'],0)
        assert np.allclose(in_memory,in_file)

    def test_add_stretch_left(self,default):
        default.add_stretch_tensor('F','V')
        loc = {'F':    default.get_dataset_location('F'),
               'V(F)': default.get_dataset_location('V(F)')}
        in_memory = mechanics.left_stretch(default.read_dataset(loc['F'],0))
        in_file   = default.read_dataset(loc['V(F)'],0)
        assert np.allclose(in_memory,in_file)