DAMASK_EICMD/code/spectral_interface.f90

!--------------------------------------------------------------------------------------------------
!> @author   Martin Diehl, Max-Planck-Institut für Eisenforschung GmbH
!> @author   Philip Eisenlohr, Max-Planck-Institut für Eisenforschung GmbH
!> @brief    Interfacing between the spectral solver and the material subroutines provided
!!           by DAMASK
!> @details  Interfacing between the spectral solver and the material subroutines provided
!>           by DAMASK. Interpretating the command line arguments or, in case of called from f2py, 
!>           the arguments parsed to the init routine to get load case, geometry file, working 
!>           directory, etc.
!--------------------------------------------------------------------------------------------------
module DAMASK_interface
 use prec, only: &
   pInt
 implicit none
 private
#include <petsc/finclude/petscsys.h>
 logical,             public, protected :: appendToOutFile = .false.                                !< Append to existing spectralOut file (in case of restart, not in case of regridding)
 integer(pInt),       public, protected :: spectralRestartInc = 1_pInt                              !< Increment at which calculation starts
 character(len=1024), public, protected :: &
   geometryFile = '', &                                                                             !< parameter given for geometry file
   loadCaseFile = ''                                                                                !< parameter given for load case file
 character(len=1024), private           :: workingDirectory                                         !< accessed by getSolverWorkingDirectoryName for compatibility reasons

 public :: &
   getSolverWorkingDirectoryName, &
   getSolverJobName, &
   DAMASK_interface_init
 private :: &
   storeWorkingDirectory, &
   getGeometryFile, &
   getLoadCaseFile, &
   rectifyPath, &
   makeRelativePath, &
   getPathSep, &
   IIO_stringValue, &
   IIO_intValue, &
   IIO_lc, &
   IIO_stringPos
contains

!--------------------------------------------------------------------------------------------------
!> @brief initializes the solver by interpreting the command line arguments. Also writes
!! information on computation to screen
!--------------------------------------------------------------------------------------------------
subroutine DAMASK_interface_init()
 use, intrinsic :: iso_fortran_env                                                                  ! to get compiler_version and compiler_options (at least for gfortran 4.6 at the moment)

 implicit none
 character(len=1024) :: &
   commandLine, &                                                                                   !< command line call as string
   loadCaseArg   ='', &                                                                             !< -l argument given to DAMASK_spectral.exe
   geometryArg   ='', &                                                                             !< -g argument given to DAMASK_spectral.exe
   workingDirArg ='', &                                                                             !< -w argument given to DAMASK_spectral.exe
   hostName, &                                                                                      !< name of machine on which DAMASK_spectral.exe is execute (might require export HOSTNAME)
   userName, &                                                                                      !< name of user calling DAMASK_spectral.exe
   tag
 integer :: &
   i, &
   threadLevel, &
   worldrank = 0, &
   worldsize = 0
 integer, allocatable, dimension(:) :: &
   chunkPos
 integer, dimension(8) :: &
   dateAndTime                                                                                      ! type default integer
 PetscErrorCode :: ierr
 external :: &
   quit,&
   MPI_Comm_rank,&
   MPI_Comm_size,&
   PETScInitialize, &
   MPI_Init_Thread, &
   MPI_abort

 open(6, encoding='UTF-8')                                                                          ! for special characters in output

!--------------------------------------------------------------------------------------------------
! PETSc Init
#ifdef _OPENMP
 call MPI_Init_Thread(MPI_THREAD_FUNNELED,threadLevel,ierr);CHKERRQ(ierr)                           ! in case of OpenMP, don't rely on PETScInitialize doing MPI init
 if (threadLevel<MPI_THREAD_FUNNELED) then
   write(6,'(a)') ' MPI library does not support OpenMP'
   call quit(1_pInt)
 endif
#endif
 call PetscInitialize(PETSC_NULL_CHARACTER,ierr)                                                    ! according to PETSc manual, that should be the first line in the code
 CHKERRQ(ierr)                                                                                      ! this is a macro definition, it is case sensitive
 call MPI_Comm_rank(PETSC_COMM_WORLD,worldrank,ierr);CHKERRQ(ierr)
 call MPI_Comm_size(MPI_COMM_WORLD, worldsize, ierr);CHKERRQ(ierr)
 mainProcess: if (worldrank == 0) then
   if (output_unit /= 6) then
     write(output_unit,'(a)') ' STDOUT != 6'
     call quit(1_pInt)
   endif
 else mainProcess
   close(6)                                                                                         ! disable output for non-master processes (open 6 to rank specific file for debug)
   open(6,file='/dev/null',status='replace')                                                        ! close(6) alone will leave some temp files in cwd
 endif mainProcess

 call date_and_time(values = dateAndTime)
 write(6,'(/,a)') ' <<<+-  DAMASK_spectral  -+>>>'
 write(6,'(/,a)')              ' Version: '//DAMASKVERSION
 write(6,'(a,2(i2.2,a),i4.4)') ' Date:    ',dateAndTime(3),'/',&
                                            dateAndTime(2),'/',&
                                            dateAndTime(1) 
 write(6,'(a,2(i2.2,a),i2.2)') ' Time:    ',dateAndTime(5),':',&
                                            dateAndTime(6),':',&
                                            dateAndTime(7)  
 write(6,'(/,a,i4.1)') ' MPI processes: ',worldsize
 write(6,'(/,a)') ' <<<+-  DAMASK_interface init  -+>>>'
#include "compilation_info.f90"
 
 call get_command(commandLine)
 chunkPos = IIO_stringPos(commandLine)
 do i = 1, chunkPos(1)
   tag = IIO_lc(IIO_stringValue(commandLine,chunkPos,i))                                            ! extract key
   select case(tag)
     case ('-h','--help')
       mainProcess2: if (worldrank == 0) then
         write(6,'(a)')  ' #######################################################################'
         write(6,'(a)')  ' DAMASK_spectral:'
         write(6,'(a)')  ' The spectral method boundary value problem solver for'
         write(6,'(a)')  ' the Düsseldorf Advanced Material Simulation Kit'
         write(6,'(a,/)')' #######################################################################'
         write(6,'(a,/)')' Valid command line switches:'
         write(6,'(a)')  '    --geom         (-g, --geometry)'
         write(6,'(a)')  '    --load         (-l, --loadcase)'
         write(6,'(a)')  '    --workingdir   (-w, --wd, --workingdirectory, -d, --directory)'
         write(6,'(a)')  '    --restart      (-r, --rs)'
         write(6,'(a)')  '    --help         (-h)'
         write(6,'(/,a)')' -----------------------------------------------------------------------'
         write(6,'(a)')  ' Mandatory arguments:'
         write(6,'(/,a)')'   --geom PathToGeomFile/NameOfGeom.geom'
         write(6,'(a)')  '        Specifies the location of the geometry definition file,' 
         write(6,'(a)')  '            if no extension is given, .geom will be appended.' 
         write(6,'(a)')  '        "PathToGeomFile" will be the working directory if not specified'
         write(6,'(a)')  '            via --workingdir.'
         write(6,'(a)')  '        Make sure the file "material.config" exists in the working'
         write(6,'(a)')  '            directory.'   
         write(6,'(a)')  '        For further configuration place "numerics.config"'
         write(6,'(a)')'            and "numerics.config" in that directory.'
         write(6,'(/,a)')'   --load PathToLoadFile/NameOfLoadFile.load'
         write(6,'(a)')  '        Specifies the location of the load case definition file,' 
         write(6,'(a)')  '            if no extension is given, .load will be appended.' 
         write(6,'(/,a)')' -----------------------------------------------------------------------'
         write(6,'(a)')  ' Optional arguments:'
         write(6,'(/,a)')'   --workingdirectory PathToWorkingDirectory'
         write(6,'(a)')  '        Specifies the working directory and overwrites the default'
         write(6,'(a)')  '            "PathToGeomFile".'
         write(6,'(a)')  '        Make sure the file "material.config" exists in the working'
         write(6,'(a)')  '            directory.'   
         write(6,'(a)')  '        For further configuration place "numerics.config"'
         write(6,'(a)')'            and "numerics.config" in that directory.'
         write(6,'(/,a)')'   --restart XX'
         write(6,'(a)')  '        Reads in total increment No. XX-1 and continues to'
         write(6,'(a)')  '            calculate total increment No. XX.'
         write(6,'(a)')  '        Appends to existing results file '
         write(6,'(a)')  '            "NameOfGeom_NameOfLoadFile.spectralOut".'
         write(6,'(a)')  '        Works only if the restart information for total increment'
         write(6,'(a)')  '             No. XX-1 is available in the working directory.'
         write(6,'(/,a)')' -----------------------------------------------------------------------'
         write(6,'(a)')  ' Help:'
         write(6,'(/,a)')'   --help'
         write(6,'(a,/)')'        Prints this message and exits'
         call quit(0_pInt)                                                                        ! normal Termination
       endif mainProcess2
     case ('-l', '--load', '--loadcase')
       loadcaseArg = IIO_stringValue(commandLine,chunkPos,i+1_pInt)
     case ('-g', '--geom', '--geometry')
       geometryArg = IIO_stringValue(commandLine,chunkPos,i+1_pInt)
     case ('-w', '-d', '--wd', '--directory', '--workingdir', '--workingdirectory')
       workingDirArg = IIO_stringValue(commandLine,chunkPos,i+1_pInt)
     case ('-r', '--rs', '--restart')
       spectralRestartInc = IIO_IntValue(commandLine,chunkPos,i+1_pInt)
       appendToOutFile = .true.
   end select
 enddo
 
 if (len(trim(loadcaseArg)) == 0 .or. len(trim(geometryArg)) == 0) then
   write(6,'(a)') ' Please specify geometry AND load case (-h for help)'
   call quit(1_pInt)
 endif

 workingDirectory = trim(storeWorkingDirectory(trim(workingDirArg),trim(geometryArg)))
 geometryFile = getGeometryFile(geometryArg)
 loadCaseFile = getLoadCaseFile(loadCaseArg)

 call get_environment_variable('HOSTNAME',hostName)
 call get_environment_variable('USER',userName)
 mainProcess3: if (worldrank == 0) then
   write(6,'(a,a)')      ' Host name:             ', trim(hostName)
   write(6,'(a,a)')      ' User name:             ', trim(userName)
   write(6,'(a,a)')      ' Path separator:        ', getPathSep()
   write(6,'(a,a)')      ' Command line call:     ', trim(commandLine)
   if (len(trim(workingDirArg))>0) &
     write(6,'(a,a)')    ' Working dir argument:  ', trim(workingDirArg)
   write(6,'(a,a)')      ' Geometry argument:     ', trim(geometryArg)
   write(6,'(a,a)')      ' Loadcase argument:     ', trim(loadcaseArg)
   write(6,'(a,a)')      ' Working directory:     ', trim(getSolverWorkingDirectoryName())
   write(6,'(a,a)')      ' Geometry file:         ', trim(geometryFile)
   write(6,'(a,a)')      ' Loadcase file:         ', trim(loadCaseFile)
   write(6,'(a,a)')      ' Solver job name:       ', trim(getSolverJobName())
   if (SpectralRestartInc > 1_pInt) &
     write(6,'(a,i6.6)') ' Restart at increment:  ', spectralRestartInc
   write(6,'(a,l1,/)')   ' Append to result file: ', appendToOutFile
 endif mainProcess3

end subroutine DAMASK_interface_init


!--------------------------------------------------------------------------------------------------
!> @brief extract working directory from given argument or from location of geometry file,
!!        possibly converting relative arguments to absolut path
!> @todo  change working directory with call chdir(storeWorkingDirectory)?
!--------------------------------------------------------------------------------------------------
character(len=1024) function storeWorkingDirectory(workingDirectoryArg,geometryArg)
 use system_routines, only: &
   isDirectory, &
   getCWD

 implicit none
 character(len=*),  intent(in) :: workingDirectoryArg                                               !< working directory argument
 character(len=*),  intent(in) :: geometryArg                                                       !< geometry argument
 character(len=1024)           :: cwd
 character                     :: pathSep
 logical                       :: error
 external                      :: quit

 pathSep = getPathSep()
 wdGiven: if (len(workingDirectoryArg)>0) then
   absolutePath: if (workingDirectoryArg(1:1) == pathSep) then
     storeWorkingDirectory = workingDirectoryArg
   else absolutePath
     error = getCWD(cwd)
     if (error) call quit(1_pInt)
     storeWorkingDirectory = trim(cwd)//pathSep//workingDirectoryArg
   endif absolutePath
   if (storeWorkingDirectory(len(trim(storeWorkingDirectory)):len(trim(storeWorkingDirectory))) /= pathSep) &
     storeWorkingDirectory = trim(storeWorkingDirectory)//pathSep                                   ! if path seperator is not given, append it
 else wdGiven
   if (geometryArg(1:1) == pathSep) then                                                            ! absolute path given as command line argument
     storeWorkingDirectory = geometryArg(1:scan(geometryArg,pathSep,back=.true.))
   else
     error = getCWD(cwd)                                                                            ! relative path given as command line argument
     if (error) call quit(1_pInt)
     storeWorkingDirectory = trim(cwd)//pathSep//geometryArg(1:scan(geometryArg,pathSep,back=.true.))
   endif
 endif wdGiven

 storeWorkingDirectory = trim(rectifyPath(storeWorkingDirectory))
 if(.not. isDirectory(trim(storeWorkingDirectory))) then                                            ! check if the directory exists
     write(6,'(a20,a,a16)') ' working directory "',trim(storeWorkingDirectory),'" does not exist'
     call quit(1_pInt)
 endif

end function storeWorkingDirectory


!--------------------------------------------------------------------------------------------------
!> @brief simply returns the private string workingDir 
!--------------------------------------------------------------------------------------------------
character(len=1024) function getSolverWorkingDirectoryName()

 implicit none
 getSolverWorkingDirectoryName = workingDirectory

end function getSolverWorkingDirectoryName


!--------------------------------------------------------------------------------------------------
!> @brief solver job name (no extension) as combination of geometry and load case name
!--------------------------------------------------------------------------------------------------
character(len=1024) function getSolverJobName()

 implicit none
 integer :: posExt,posSep
 character :: pathSep
 character(len=1024) :: tempString 

 pathSep = getPathSep()

 tempString = geometryFile
 posExt = scan(tempString,'.',back=.true.)
 posSep = scan(tempString,pathSep,back=.true.)

 getSolverJobName = tempString(posSep+1:posExt-1)

 tempString = loadCaseFile
 posExt = scan(tempString,'.',back=.true.)
 posSep = scan(tempString,pathSep,back=.true.)

 getSolverJobName = trim(getSolverJobName)//'_'//tempString(posSep+1:posExt-1)

end function getSolverJobName


!--------------------------------------------------------------------------------------------------
!> @brief basename of geometry file with extension from command line arguments
!--------------------------------------------------------------------------------------------------
character(len=1024) function getGeometryFile(geometryParameter)
 use system_routines, only: &
   getCWD

 implicit none
 character(len=1024), intent(in) :: &
   geometryParameter
 character(len=1024) :: &
   cwd
 integer :: posExt, posSep
 logical :: error
 character :: pathSep
 external  :: quit

 getGeometryFile = geometryParameter
 pathSep = getPathSep()
 posExt = scan(getGeometryFile,'.',back=.true.)
 posSep = scan(getGeometryFile,pathSep,back=.true.)

 if (posExt <= posSep) getGeometryFile = trim(getGeometryFile)//('.geom')                           ! no extension present
 if (scan(getGeometryFile,pathSep) /= 1) then                                                       ! relative path given as command line argument
   error = getcwd(cwd)
   if (error) call quit(1_pInt)
   getGeometryFile = rectifyPath(trim(cwd)//pathSep//getGeometryFile)
 else
   getGeometryFile = rectifyPath(getGeometryFile)
 endif

 getGeometryFile = makeRelativePath(getSolverWorkingDirectoryName(), getGeometryFile)

end function getGeometryFile


!--------------------------------------------------------------------------------------------------
!> @brief relative path of loadcase from command line arguments
!--------------------------------------------------------------------------------------------------
character(len=1024) function getLoadCaseFile(loadCaseParameter)
 use system_routines, only: &
   getCWD

 implicit none
 character(len=1024), intent(in) :: &
   loadCaseParameter
 character(len=1024) :: &
   cwd
 integer :: posExt, posSep
 logical :: error
 character :: pathSep
 external  :: quit

 getLoadCaseFile = loadcaseParameter
 pathSep = getPathSep()
 posExt = scan(getLoadCaseFile,'.',back=.true.)
 posSep = scan(getLoadCaseFile,pathSep,back=.true.)

 if (posExt <= posSep) getLoadCaseFile = trim(getLoadCaseFile)//('.load')                           ! no extension present
 if (scan(getLoadCaseFile,pathSep) /= 1) then                                                       ! relative path given as command line argument
   error = getcwd(cwd)
   if (error) call quit(1_pInt)
   getLoadCaseFile = rectifyPath(trim(cwd)//pathSep//getLoadCaseFile)
 else
   getLoadCaseFile = rectifyPath(getLoadCaseFile)
 endif

 getLoadCaseFile = makeRelativePath(getSolverWorkingDirectoryName(), getLoadCaseFile)

end function getLoadCaseFile


!--------------------------------------------------------------------------------------------------
!> @brief remove ../ and /./ from path
!--------------------------------------------------------------------------------------------------
function rectifyPath(path)

 implicit none
 character(len=*) :: path
 character(len=len_trim(path)) :: rectifyPath
 character :: pathSep
 integer :: i,j,k,l                                                                                 ! no pInt

 pathSep = getPathSep()

!--------------------------------------------------------------------------------------------------
! remove /./ from path
 l = len_trim(path)
 rectifyPath = path
 do i = l,3,-1
   if (rectifyPath(i-2:i) == pathSep//'.'//pathSep) &
     rectifyPath(i-1:l) = rectifyPath(i+1:l)//'  '
 enddo

!--------------------------------------------------------------------------------------------------
! remove ../ and corresponding directory from rectifyPath
 l = len_trim(rectifyPath)
 i = index(rectifyPath(i:l),'..'//pathSep)
 j = 0
 do while (i > j)
    j = scan(rectifyPath(1:i-2),pathSep,back=.true.)
    rectifyPath(j+1:l) = rectifyPath(i+3:l)//repeat(' ',2+i-j)
    if (rectifyPath(j+1:j+1) == pathSep) then                                                       !search for '//' that appear in case of XXX/../../XXX
      k = len_trim(rectifyPath)
      rectifyPath(j+1:k-1) = rectifyPath(j+2:k)
      rectifyPath(k:k) = ' '
    endif
    i = j+index(rectifyPath(j+1:l),'..'//pathSep)
 enddo
 if(len_trim(rectifyPath) == 0) rectifyPath = pathSep

end function rectifyPath

 
!--------------------------------------------------------------------------------------------------
!> @brief relative path from absolute a to absolute b
!--------------------------------------------------------------------------------------------------
character(len=1024) function makeRelativePath(a,b)

 implicit none
 character (len=*) :: a,b
 character :: pathSep
 integer :: i,posLastCommonSlash,remainingSlashes !no pInt

 pathSep = getPathSep()
 posLastCommonSlash = 0
 remainingSlashes = 0

 do i = 1, min(1024,len_trim(a),len_trim(b))
   if (a(i:i) /= b(i:i)) exit
   if (a(i:i) == pathSep) posLastCommonSlash = i
 enddo
 do i = posLastCommonSlash+1,len_trim(a)
   if (a(i:i) == pathSep) remainingSlashes = remainingSlashes + 1
 enddo
 makeRelativePath = repeat('..'//pathSep,remainingSlashes)//b(posLastCommonSlash+1:len_trim(b))

end function makeRelativePath


!--------------------------------------------------------------------------------------------------
!> @brief counting / and \ in $PATH System variable the character occuring more often is assumed
! to be the path separator
!--------------------------------------------------------------------------------------------------
character function getPathSep()

 implicit none
 character(len=2048) :: &
   path
 integer(pInt) :: &
   backslash = 0_pInt, &
   slash = 0_pInt
 integer :: i

 call get_environment_variable('PATH',path)
 do i=1, len(trim(path))
   if (path(i:i)=='/') slash     =     slash + 1_pInt
   if (path(i:i)=='\') backslash = backslash + 1_pInt
 enddo

 if (backslash>slash) then
   getPathSep = '\'
 else
   getPathSep = '/'
 endif

end function getPathSep


!--------------------------------------------------------------------------------------------------
!> @brief taken from IO, check IO_stringValue for documentation 
!--------------------------------------------------------------------------------------------------
pure function IIO_stringValue(string,chunkPos,myChunk)
 
 implicit none
 integer(pInt),   dimension(:),                intent(in) :: chunkPos                               !< positions of start and end of each tag/chunk in given string
 integer(pInt),                                intent(in) :: myChunk                                !< position number of desired chunk
 character(len=1+chunkPos(myChunk*2+1)-chunkPos(myChunk*2))   :: IIO_stringValue
 character(len=*),                             intent(in) :: string                                 !< raw input with known start and end of each chunk

 
 valuePresent: if (myChunk > chunkPos(1) .or. myChunk < 1_pInt) then
   IIO_stringValue = ''
 else valuePresent
   IIO_stringValue = string(chunkPos(myChunk*2):chunkPos(myChunk*2+1))
 endif valuePresent

end function IIO_stringValue


!--------------------------------------------------------------------------------------------------
!> @brief taken from IO, check IO_intValue for documentation 
!--------------------------------------------------------------------------------------------------
integer(pInt) pure function IIO_intValue(string,chunkPos,myChunk)                                           
                                                                                                    
 implicit none                                                                                      
 character(len=*),               intent(in) :: string                                               !< raw input with known start and end of each chunk
 integer(pInt),                  intent(in) :: myChunk                                              !< position number of desired sub string
 integer(pInt),   dimension(:),  intent(in) :: chunkPos                                             !< positions of start and end of each tag/chunk in given string


 valuePresent: if (myChunk > chunkPos(1) .or. myChunk < 1_pInt) then
   IIO_intValue = 0_pInt
 else valuePresent
   read(UNIT=string(chunkPos(myChunk*2):chunkPos(myChunk*2+1)),ERR=100,FMT=*) IIO_intValue
 endif valuePresent
 return
100 IIO_intValue = huge(1_pInt)

end function IIO_intValue


!--------------------------------------------------------------------------------------------------
!> @brief taken from IO, check IO_lc for documentation 
!--------------------------------------------------------------------------------------------------
pure function IIO_lc(string)

 implicit none
 character(len=*), intent(in) :: string                                                             !< string to convert
 character(len=len(string))   :: IIO_lc

 character(26), parameter :: LOWER = 'abcdefghijklmnopqrstuvwxyz'
 character(26), parameter :: UPPER = 'ABCDEFGHIJKLMNOPQRSTUVWXYZ' 
 
 integer                      :: i,n                                                                ! no pInt (len returns default integer)

 IIO_lc = string
 do i=1,len(string)
   n = index(UPPER,IIO_lc(i:i))
   if (n/=0) IIO_lc(i:i) = LOWER(n:n)
 enddo

end function IIO_lc


!--------------------------------------------------------------------------------------------------
!> @brief taken from IO, check IO_stringPos for documentation 
!--------------------------------------------------------------------------------------------------
pure function IIO_stringPos(string)

 implicit none
 integer(pInt), dimension(:), allocatable            :: IIO_stringPos
 character(len=*),                        intent(in) :: string                                      !< string in which chunks are searched for
 
 character(len=*), parameter  :: SEP=achar(44)//achar(32)//achar(9)//achar(10)//achar(13)           ! comma and whitespaces
 integer                      :: left, right                                                        ! no pInt (verify and scan return default integer)

 allocate(IIO_stringPos(1), source=0_pInt)
 right = 0
 
 do while (verify(string(right+1:),SEP)>0)
   left  = right + verify(string(right+1:),SEP)
   right = left + scan(string(left:),SEP) - 2
   if ( string(left:left) == '#' ) exit
   IIO_stringPos = [IIO_stringPos,int(left, pInt), int(right, pInt)]
   IIO_stringPos(1) = IIO_stringPos(1)+1_pInt
 enddo

end function IIO_stringPos


end module