2017-11-21 19:45:55 +05:30
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From 87e307a9c511f3f40598edbd5996297d7804ce62 Mon Sep 17 00:00:00 2001
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2017-11-05 18:49:34 +05:30
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From: Martin Diehl <m.diehl@mpie.de>
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2017-11-21 19:45:55 +05:30
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Date: Tue, 21 Nov 2017 15:12:04 +0100
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Subject: [PATCH] due to changes in interface of PETSc
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2017-11-05 18:49:34 +05:30
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---
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2017-11-21 19:45:55 +05:30
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src/DAMASK_spectral.f90 | 27 +++++---------
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src/mesh.f90 | 12 +++---
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src/numerics.f90 | 13 +++----
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src/spectral_damage.f90 | 39 ++++++--------------
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src/spectral_interface.f90 | 31 ++++++++--------
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src/spectral_mech_AL.f90 | 46 ++++++++---------------
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src/spectral_mech_Basic.f90 | 52 +++++++++-----------------
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src/spectral_mech_Polarisation.f90 | 52 ++++++++++----------------
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src/spectral_thermal.f90 | 75 ++++++++++++++++++--------------------
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src/spectral_utilities.f90 | 34 ++++++-----------
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10 files changed, 146 insertions(+), 235 deletions(-)
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2017-11-05 18:49:34 +05:30
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diff --git a/src/DAMASK_spectral.f90 b/src/DAMASK_spectral.f90
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2017-11-20 17:27:30 +05:30
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index f32bfb7b..c315b1b8 100644
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2017-11-05 18:49:34 +05:30
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--- a/src/DAMASK_spectral.f90
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+++ b/src/DAMASK_spectral.f90
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@@ -12,6 +12,8 @@ program DAMASK_spectral
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compiler_version, &
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compiler_options
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#endif
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+#include <petsc/finclude/petscsys.h>
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+ use PETSC
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use prec, only: &
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pInt, &
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pLongInt, &
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@@ -85,11 +87,8 @@ program DAMASK_spectral
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use spectral_damage
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use spectral_thermal
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-
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implicit none
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-#include <petsc/finclude/petscsys.h>
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-
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!--------------------------------------------------------------------------------------------------
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! variables related to information from load case and geom file
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real(pReal), dimension(9) :: temp_valueVector = 0.0_pReal !< temporarily from loadcase file when reading in tensors (initialize to 0.0)
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@@ -144,18 +143,11 @@ program DAMASK_spectral
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integer(pInt), parameter :: maxByteOut = 2147483647-4096 !< limit of one file output write https://trac.mpich.org/projects/mpich/ticket/1742
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integer(pInt), parameter :: maxRealOut = maxByteOut/pReal
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integer(pLongInt), dimension(2) :: outputIndex
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- PetscErrorCode :: ierr
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+ integer :: ierr
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+
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external :: &
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- quit, &
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- MPI_file_open, &
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- MPI_file_close, &
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- MPI_file_seek, &
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- MPI_file_get_position, &
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- MPI_file_write, &
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- MPI_abort, &
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- MPI_finalize, &
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- MPI_allreduce, &
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- PETScFinalize
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+ quit
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+
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!--------------------------------------------------------------------------------------------------
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! init DAMASK (all modules)
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@@ -448,7 +440,7 @@ program DAMASK_spectral
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call MPI_file_write(resUnit, &
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reshape(materialpoint_results(:,:,outputIndex(1):outputIndex(2)), &
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2017-11-20 17:27:30 +05:30
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[(outputIndex(2)-outputIndex(1)+1)*int(materialpoint_sizeResults,pLongInt)]), &
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- (outputIndex(2)-outputIndex(1)+1)*int(materialpoint_sizeResults,pLongInt), &
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+ int(outputIndex(2)-outputIndex(1)+1)*materialpoint_sizeResults, &
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2017-11-05 18:49:34 +05:30
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MPI_DOUBLE, MPI_STATUS_IGNORE, ierr)
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if (ierr /= 0_pInt) call IO_error(error_ID=894_pInt, ext_msg='MPI_file_write')
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enddo
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@@ -636,8 +628,7 @@ program DAMASK_spectral
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notConvergedCounter = notConvergedCounter + 1_pInt
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endif; flush(6)
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if (mod(inc,loadCases(currentLoadCase)%outputFrequency) == 0_pInt) then ! at output frequency
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- if (worldrank == 0) &
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- write(6,'(1/,a)') ' ... writing results to file ......................................'
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+ write(6,'(1/,a)') ' ... writing results to file ......................................'
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call materialpoint_postResults()
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call MPI_file_seek (resUnit,fileOffset,MPI_SEEK_SET,ierr)
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if(ierr /=0_pInt) call IO_error(894_pInt, ext_msg='MPI_file_seek')
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@@ -646,7 +637,7 @@ program DAMASK_spectral
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min(i*((maxRealOut)/materialpoint_sizeResults),size(materialpoint_results,3))],pLongInt)
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call MPI_file_write(resUnit,reshape(materialpoint_results(:,:,outputIndex(1):outputIndex(2)),&
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2017-11-20 17:27:30 +05:30
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[(outputIndex(2)-outputIndex(1)+1)*int(materialpoint_sizeResults,pLongInt)]), &
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- (outputIndex(2)-outputIndex(1)+1)*int(materialpoint_sizeResults,pLongInt),&
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+ int(outputIndex(2)-outputIndex(1)+1)*materialpoint_sizeResults,&
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2017-11-05 18:49:34 +05:30
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MPI_DOUBLE, MPI_STATUS_IGNORE, ierr)
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if(ierr /=0_pInt) call IO_error(894_pInt, ext_msg='MPI_file_write')
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enddo
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diff --git a/src/mesh.f90 b/src/mesh.f90
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2017-11-20 17:27:30 +05:30
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index 666fe1e3..a314c22c 100644
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2017-11-05 18:49:34 +05:30
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--- a/src/mesh.f90
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+++ b/src/mesh.f90
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@@ -115,11 +115,6 @@ module mesh
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logical, private :: noPart !< for cases where the ABAQUS input file does not use part/assembly information
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#endif
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-#ifdef Spectral
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-#include <petsc/finclude/petscsys.h>
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- include 'fftw3-mpi.f03'
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-#endif
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-
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! These definitions should actually reside in the FE-solver specific part (different for MARC/ABAQUS)
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! Hence, I suggest to prefix with "FE_"
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@@ -476,6 +471,10 @@ subroutine mesh_init(ip,el)
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use, intrinsic :: iso_fortran_env, only: &
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compiler_version, &
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compiler_options
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+#endif
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+#ifdef Spectral
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+#include <petsc/finclude/petscsys.h>
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+ use petscsys
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#endif
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use DAMASK_interface
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use IO, only: &
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@@ -511,6 +510,7 @@ subroutine mesh_init(ip,el)
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implicit none
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#ifdef Spectral
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+ include 'fftw3-mpi.f03'
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integer(C_INTPTR_T) :: devNull, local_K, local_K_offset
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integer :: ierr, worldsize
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#endif
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2017-11-20 17:27:30 +05:30
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@@ -518,8 +518,6 @@ subroutine mesh_init(ip,el)
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integer(pInt), intent(in) :: el, ip
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integer(pInt) :: j
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logical :: myDebug
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-
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- external :: MPI_comm_size
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write(6,'(/,a)') ' <<<+- mesh init -+>>>'
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write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
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2017-11-05 18:49:34 +05:30
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diff --git a/src/numerics.f90 b/src/numerics.f90
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2017-11-20 17:27:30 +05:30
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index 70c7f3c3..e7d54893 100644
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2017-11-05 18:49:34 +05:30
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--- a/src/numerics.f90
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+++ b/src/numerics.f90
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@@ -10,9 +10,6 @@ module numerics
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implicit none
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private
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-#ifdef PETSc
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-#include <petsc/finclude/petsc.h90>
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-#endif
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character(len=64), parameter, private :: &
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numerics_CONFIGFILE = 'numerics.config' !< name of configuration file
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@@ -216,6 +213,10 @@ subroutine numerics_init
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IO_warning, &
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IO_timeStamp, &
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IO_EOF
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+#ifdef PETSc
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+#include <petsc/finclude/petscsys.h>
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+ use petscsys
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+#endif
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#if defined(Spectral) || defined(FEM)
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!$ use OMP_LIB, only: omp_set_num_threads ! Use the standard conforming module file for omp if using the spectral solver
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implicit none
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@@ -232,10 +233,8 @@ subroutine numerics_init
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line
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!$ character(len=6) DAMASK_NumThreadsString ! environment variable DAMASK_NUM_THREADS
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external :: &
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- MPI_Comm_rank, &
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- MPI_Comm_size, &
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- MPI_Abort
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-
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+ PETScErrorF ! is called in the CHKERRQ macro
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+
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#ifdef PETSc
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call MPI_Comm_rank(PETSC_COMM_WORLD,worldrank,ierr);CHKERRQ(ierr)
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call MPI_Comm_size(PETSC_COMM_WORLD,worldsize,ierr);CHKERRQ(ierr)
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diff --git a/src/spectral_damage.f90 b/src/spectral_damage.f90
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2017-11-20 17:27:30 +05:30
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index 72765987..11da3b96 100644
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2017-11-05 18:49:34 +05:30
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--- a/src/spectral_damage.f90
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+++ b/src/spectral_damage.f90
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@@ -4,8 +4,10 @@
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!> @brief Spectral solver for nonlocal damage
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!--------------------------------------------------------------------------------------------------
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module spectral_damage
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+#include <petsc/finclude/petsc.h>
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+ use PETSC
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use prec, only: &
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- pInt, &
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+ PInt, &
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pReal
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use math, only: &
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math_I3
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@@ -18,7 +20,6 @@ module spectral_damage
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implicit none
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private
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-#include <petsc/finclude/petsc.h90>
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character (len=*), parameter, public :: &
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spectral_damage_label = 'spectraldamage'
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@@ -48,11 +49,9 @@ module spectral_damage
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spectral_damage_solution, &
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spectral_damage_forward, &
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spectral_damage_destroy
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+
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external :: &
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- PETScFinalize, &
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- MPI_Abort, &
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- MPI_Bcast, &
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- MPI_Allreduce
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+ PETScErrorF ! is called in the CHKERRQ macro
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contains
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@@ -86,21 +85,12 @@ subroutine spectral_damage_init()
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Vec :: uBound, lBound
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PetscErrorCode :: ierr
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character(len=100) :: snes_type
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-
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external :: &
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- SNESCreate, &
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SNESSetOptionsPrefix, &
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+ SNESGetType, &
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DMDACreate3D, &
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- SNESSetDM, &
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DMDAGetCorners, &
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- DMCreateGlobalVector, &
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- DMDASNESSetFunctionLocal, &
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- SNESSetFromOptions, &
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- SNESGetType, &
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- VecSet, &
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- DMGetGlobalVector, &
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- DMRestoreGlobalVector, &
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- SNESVISetVariableBounds
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+ DMDASNESSetFunctionLocal
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write(6,'(/,a)') ' <<<+- spectral_damage init -+>>>'
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write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
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@@ -114,7 +104,7 @@ subroutine spectral_damage_init()
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do proc = 1, worldsize
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call MPI_Bcast(localK(proc),1,MPI_INTEGER,proc-1,PETSC_COMM_WORLD,ierr)
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enddo
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- call DMDACreate3d(PETSC_COMM_WORLD, &
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+ call DMDACreate3D(PETSC_COMM_WORLD, &
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DM_BOUNDARY_NONE, DM_BOUNDARY_NONE, DM_BOUNDARY_NONE, & !< cut off stencil at boundary
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DMDA_STENCIL_BOX, & !< Moore (26) neighborhood around central point
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grid(1),grid(2),grid(3), & !< global grid
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2017-11-20 17:27:30 +05:30
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@@ -124,9 +114,11 @@ subroutine spectral_damage_init()
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damage_grid,ierr) !< handle, error
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CHKERRQ(ierr)
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2017-11-05 18:49:34 +05:30
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call SNESSetDM(damage_snes,damage_grid,ierr); CHKERRQ(ierr) !< connect snes to da
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+ call DMsetFromOptions(damage_grid,ierr); CHKERRQ(ierr)
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+ call DMsetUp(damage_grid,ierr); CHKERRQ(ierr)
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2017-11-05 18:49:34 +05:30
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call DMCreateGlobalVector(damage_grid,solution,ierr); CHKERRQ(ierr) !< global solution vector (grid x 1, i.e. every def grad tensor)
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call DMDASNESSetFunctionLocal(damage_grid,INSERT_VALUES,spectral_damage_formResidual,&
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- PETSC_NULL_OBJECT,ierr) !< residual vector of same shape as solution vector
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+ PETSC_NULL_SNES,ierr) !< residual vector of same shape as solution vector
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CHKERRQ(ierr)
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call SNESSetFromOptions(damage_snes,ierr); CHKERRQ(ierr) !< pull it all together with additional cli arguments
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call SNESGetType(damage_snes,snes_type,ierr); CHKERRQ(ierr)
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2017-11-20 17:27:30 +05:30
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@@ -214,7 +206,7 @@ type(tSolutionState) function spectral_damage_solution(timeinc,timeinc_old,loadC
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2017-11-05 18:49:34 +05:30
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params%timeinc = timeinc
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params%timeincOld = timeinc_old
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- call SNESSolve(damage_snes,PETSC_NULL_OBJECT,solution,ierr); CHKERRQ(ierr)
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2017-11-20 17:27:30 +05:30
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+ call SNESSolve(damage_snes,PETSC_NULL_VEC,solution,ierr); CHKERRQ(ierr)
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2017-11-05 18:49:34 +05:30
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call SNESGetConvergedReason(damage_snes,reason,ierr); CHKERRQ(ierr)
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if (reason < 1) then
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2017-11-20 17:27:30 +05:30
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@@ -360,9 +352,6 @@ subroutine spectral_damage_forward()
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2017-11-05 18:49:34 +05:30
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PetscScalar, dimension(:,:,:), pointer :: x_scal
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PetscErrorCode :: ierr
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- external :: &
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- SNESGetDM
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-
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if (cutBack) then
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damage_current = damage_lastInc
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damage_stagInc = damage_lastInc
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2017-11-20 17:27:30 +05:30
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@@ -405,10 +394,6 @@ subroutine spectral_damage_destroy()
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2017-11-05 18:49:34 +05:30
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implicit none
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PetscErrorCode :: ierr
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- external :: &
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- VecDestroy, &
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- SNESDestroy
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-
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call VecDestroy(solution,ierr); CHKERRQ(ierr)
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call SNESDestroy(damage_snes,ierr); CHKERRQ(ierr)
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diff --git a/src/spectral_interface.f90 b/src/spectral_interface.f90
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index 3c8489d0..51360ac1 100644
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--- a/src/spectral_interface.f90
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+++ b/src/spectral_interface.f90
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@@ -11,9 +11,9 @@
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module DAMASK_interface
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use prec, only: &
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pInt
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+
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implicit none
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private
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-#include <petsc/finclude/petscsys.h>
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logical, public, protected :: appendToOutFile = .false. !< Append to existing spectralOut file (in case of restart, not in case of regridding)
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|
integer(pInt), public, protected :: spectralRestartInc = 1_pInt !< Increment at which calculation starts
|
|
|
|
character(len=1024), public, protected :: &
|
|
|
|
@@ -44,7 +44,13 @@ contains
|
|
|
|
subroutine DAMASK_interface_init()
|
|
|
|
use, intrinsic :: &
|
|
|
|
iso_fortran_env
|
|
|
|
-
|
|
|
|
+#include <petsc/finclude/petscsys.h>
|
|
|
|
+#if PETSC_VERSION_MAJOR!=3 || PETSC_VERSION_MINOR!=8
|
|
|
|
+===================================================================================================
|
|
|
|
+========================= THIS VERSION OF DAMASK REQUIRES PETSc 3.8.x =========================
|
|
|
|
+===================================================================================================
|
|
|
|
+#endif
|
|
|
|
+ use PETScSys
|
|
|
|
use system_routines, only: &
|
|
|
|
getHostName
|
|
|
|
|
|
|
|
@@ -71,12 +77,9 @@ subroutine DAMASK_interface_init()
|
|
|
|
PetscErrorCode :: ierr
|
|
|
|
logical :: error
|
|
|
|
external :: &
|
|
|
|
- quit,&
|
|
|
|
- MPI_Comm_rank,&
|
|
|
|
- MPI_Comm_size,&
|
|
|
|
- PETScInitialize, &
|
|
|
|
- MPI_Init_Thread, &
|
|
|
|
- MPI_abort
|
|
|
|
+ quit, &
|
|
|
|
+ PETScErrorF, & ! is called in the CHKERRQ macro
|
|
|
|
+ PETScInitialize
|
|
|
|
|
|
|
|
open(6, encoding='UTF-8') ! for special characters in output
|
|
|
|
|
|
|
|
@@ -89,7 +92,7 @@ subroutine DAMASK_interface_init()
|
|
|
|
call quit(1_pInt)
|
|
|
|
endif
|
|
|
|
#endif
|
|
|
|
- call PetscInitialize(PETSC_NULL_CHARACTER,ierr) ! according to PETSc manual, that should be the first line in the code
|
|
|
|
+ call PETScInitialize(PETSC_NULL_CHARACTER,ierr) ! according to PETSc manual, that should be the first line in the code
|
|
|
|
CHKERRQ(ierr) ! this is a macro definition, it is case sensitive
|
|
|
|
call MPI_Comm_rank(PETSC_COMM_WORLD,worldrank,ierr);CHKERRQ(ierr)
|
|
|
|
call MPI_Comm_size(PETSC_COMM_WORLD,worldsize,ierr);CHKERRQ(ierr)
|
|
|
|
@@ -102,10 +105,6 @@ subroutine DAMASK_interface_init()
|
|
|
|
write(output_unit,'(a)') ' STDERR != 0'
|
|
|
|
call quit(1_pInt)
|
|
|
|
endif
|
|
|
|
- if (PETSC_VERSION_MAJOR /= 3 .or. PETSC_VERSION_MINOR /= 7) then
|
|
|
|
- write(6,'(a,2(i1.1,a))') 'PETSc ',PETSC_VERSION_MAJOR,'.',PETSC_VERSION_MINOR,'.x not supported'
|
|
|
|
- call quit(1_pInt)
|
|
|
|
- endif
|
|
|
|
else mainProcess
|
|
|
|
close(6) ! disable output for non-master processes (open 6 to rank specific file for debug)
|
|
|
|
open(6,file='/dev/null',status='replace') ! close(6) alone will leave some temp files in cwd
|
|
|
|
@@ -312,9 +311,9 @@ character(len=1024) function getGeometryFile(geometryParameter)
|
|
|
|
geometryParameter
|
|
|
|
character(len=1024) :: &
|
|
|
|
cwd
|
|
|
|
- integer :: posExt, posSep
|
|
|
|
- logical :: error
|
|
|
|
- external :: quit
|
|
|
|
+ integer :: posExt, posSep
|
|
|
|
+ logical :: error
|
|
|
|
+ external :: quit
|
|
|
|
|
|
|
|
getGeometryFile = geometryParameter
|
|
|
|
posExt = scan(getGeometryFile,'.',back=.true.)
|
|
|
|
diff --git a/src/spectral_mech_AL.f90 b/src/spectral_mech_AL.f90
|
2017-11-20 17:27:30 +05:30
|
|
|
index 6d0fff28..dc221f6c 100644
|
2017-11-05 18:49:34 +05:30
|
|
|
--- a/src/spectral_mech_AL.f90
|
|
|
|
+++ b/src/spectral_mech_AL.f90
|
|
|
|
@@ -5,6 +5,8 @@
|
|
|
|
!> @brief AL scheme solver
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
module spectral_mech_AL
|
|
|
|
+#include <petsc/finclude/petsc.h>
|
|
|
|
+ use PETSC
|
|
|
|
use prec, only: &
|
|
|
|
pInt, &
|
|
|
|
pReal
|
|
|
|
@@ -16,7 +18,6 @@ module spectral_mech_AL
|
|
|
|
|
|
|
|
implicit none
|
|
|
|
private
|
|
|
|
-#include <petsc/finclude/petsc.h90>
|
|
|
|
|
|
|
|
character (len=*), parameter, public :: &
|
|
|
|
DAMASK_spectral_solverAL_label = 'al'
|
|
|
|
@@ -71,11 +72,9 @@ module spectral_mech_AL
|
|
|
|
AL_solution, &
|
|
|
|
AL_forward, &
|
|
|
|
AL_destroy
|
|
|
|
+
|
|
|
|
external :: &
|
|
|
|
- PETScFinalize, &
|
|
|
|
- MPI_Abort, &
|
|
|
|
- MPI_Bcast, &
|
|
|
|
- MPI_Allreduce
|
|
|
|
+ PETScErrorF ! is called in the CHKERRQ macro
|
|
|
|
|
|
|
|
contains
|
|
|
|
|
|
|
|
@@ -121,21 +120,17 @@ subroutine AL_init
|
|
|
|
|
|
|
|
PetscErrorCode :: ierr
|
|
|
|
PetscScalar, pointer, dimension(:,:,:,:) :: xx_psc, F, F_lambda
|
|
|
|
+
|
|
|
|
integer(pInt), dimension(:), allocatable :: localK
|
|
|
|
integer(pInt) :: proc
|
|
|
|
character(len=1024) :: rankStr
|
|
|
|
-
|
|
|
|
+
|
|
|
|
external :: &
|
|
|
|
- SNESCreate, &
|
|
|
|
- SNESSetOptionsPrefix, &
|
|
|
|
- DMDACreate3D, &
|
|
|
|
- SNESSetDM, &
|
|
|
|
- DMCreateGlobalVector, &
|
|
|
|
- DMDASNESSetFunctionLocal, &
|
|
|
|
- SNESGetConvergedReason, &
|
|
|
|
+ SNESsetOptionsPrefix, &
|
|
|
|
SNESSetConvergenceTest, &
|
|
|
|
- SNESSetFromOptions
|
|
|
|
-
|
|
|
|
+ DMDAcreate3D, &
|
|
|
|
+ DMDASNESsetFunctionLocal
|
|
|
|
+
|
|
|
|
write(6,'(/,a)') ' <<<+- DAMASK_spectral_solverAL init -+>>>'
|
|
|
|
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
|
|
|
|
#include "compilation_info.f90"
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -165,10 +160,12 @@ subroutine AL_init
|
|
|
|
da,ierr) ! handle, error
|
2017-11-05 18:49:34 +05:30
|
|
|
CHKERRQ(ierr)
|
|
|
|
call SNESSetDM(snes,da,ierr); CHKERRQ(ierr)
|
2017-11-20 17:27:30 +05:30
|
|
|
+ call DMsetFromOptions(da,ierr); CHKERRQ(ierr)
|
|
|
|
+ call DMsetUp(da,ierr); CHKERRQ(ierr)
|
2017-11-05 18:49:34 +05:30
|
|
|
call DMCreateGlobalVector(da,solution_vec,ierr); CHKERRQ(ierr)
|
|
|
|
- call DMDASNESSetFunctionLocal(da,INSERT_VALUES,AL_formResidual,PETSC_NULL_OBJECT,ierr)
|
|
|
|
+ call DMDASNESSetFunctionLocal(da,INSERT_VALUES,AL_formResidual,PETSC_NULL_SNES,ierr)
|
|
|
|
CHKERRQ(ierr)
|
|
|
|
- call SNESSetConvergenceTest(snes,AL_converged,PETSC_NULL_OBJECT,PETSC_NULL_FUNCTION,ierr)
|
|
|
|
+ call SNESSetConvergenceTest(snes,AL_converged,PETSC_NULL_SNES,PETSC_NULL_FUNCTION,ierr)
|
|
|
|
CHKERRQ(ierr)
|
|
|
|
call SNESSetFromOptions(snes,ierr); CHKERRQ(ierr)
|
|
|
|
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -280,8 +277,7 @@ type(tSolutionState) function &
|
2017-11-05 18:49:34 +05:30
|
|
|
SNESConvergedReason :: reason
|
|
|
|
|
|
|
|
external :: &
|
|
|
|
- SNESSolve, &
|
|
|
|
- SNESGetConvergedReason
|
|
|
|
+ SNESsolve
|
|
|
|
|
|
|
|
incInfo = incInfoIn
|
|
|
|
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -304,8 +300,7 @@ type(tSolutionState) function &
|
2017-11-05 18:49:34 +05:30
|
|
|
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
! solve BVP
|
|
|
|
- call SNESSolve(snes,PETSC_NULL_OBJECT,solution_vec,ierr)
|
2017-11-20 17:27:30 +05:30
|
|
|
- CHKERRQ(ierr)
|
|
|
|
+ call SNESsolve(snes,PETSC_NULL_VEC,solution_vec,ierr); CHKERRQ(ierr)
|
2017-11-05 18:49:34 +05:30
|
|
|
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
2017-11-20 17:27:30 +05:30
|
|
|
! check convergence
|
|
|
|
@@ -383,10 +378,6 @@ subroutine AL_formResidual(in,x_scal,f_scal,dummy,ierr)
|
2017-11-05 18:49:34 +05:30
|
|
|
integer(pInt) :: &
|
|
|
|
i, j, k, e
|
|
|
|
|
|
|
|
- external :: &
|
|
|
|
- SNESGetNumberFunctionEvals, &
|
|
|
|
- SNESGetIterationNumber
|
|
|
|
-
|
|
|
|
F => x_scal(1:3,1:3,1,&
|
|
|
|
XG_RANGE,YG_RANGE,ZG_RANGE)
|
|
|
|
F_lambda => x_scal(1:3,1:3,2,&
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -697,11 +688,6 @@ subroutine AL_destroy()
|
2017-11-05 18:49:34 +05:30
|
|
|
implicit none
|
|
|
|
PetscErrorCode :: ierr
|
|
|
|
|
|
|
|
- external :: &
|
|
|
|
- VecDestroy, &
|
|
|
|
- SNESDestroy, &
|
|
|
|
- DMDestroy
|
|
|
|
-
|
|
|
|
call VecDestroy(solution_vec,ierr); CHKERRQ(ierr)
|
|
|
|
call SNESDestroy(snes,ierr); CHKERRQ(ierr)
|
|
|
|
call DMDestroy(da,ierr); CHKERRQ(ierr)
|
|
|
|
diff --git a/src/spectral_mech_Basic.f90 b/src/spectral_mech_Basic.f90
|
2017-11-20 17:27:30 +05:30
|
|
|
index 55403ee7..fe9eb493 100644
|
2017-11-05 18:49:34 +05:30
|
|
|
--- a/src/spectral_mech_Basic.f90
|
|
|
|
+++ b/src/spectral_mech_Basic.f90
|
|
|
|
@@ -5,6 +5,8 @@
|
|
|
|
!> @brief Basic scheme PETSc solver
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
module spectral_mech_basic
|
|
|
|
+#include <petsc/finclude/petsc.h>
|
|
|
|
+ use PETSC
|
|
|
|
use prec, only: &
|
|
|
|
pInt, &
|
|
|
|
pReal
|
|
|
|
@@ -16,7 +18,6 @@ module spectral_mech_basic
|
|
|
|
|
|
|
|
implicit none
|
|
|
|
private
|
|
|
|
-#include <petsc/finclude/petsc.h90>
|
|
|
|
|
|
|
|
character (len=*), parameter, public :: &
|
|
|
|
DAMASK_spectral_SolverBasicPETSC_label = 'basicpetsc'
|
|
|
|
@@ -60,11 +61,9 @@ module spectral_mech_basic
|
|
|
|
basicPETSc_solution, &
|
|
|
|
BasicPETSc_forward, &
|
|
|
|
basicPETSc_destroy
|
|
|
|
+
|
|
|
|
external :: &
|
|
|
|
- PETScFinalize, &
|
|
|
|
- MPI_Abort, &
|
|
|
|
- MPI_Bcast, &
|
|
|
|
- MPI_Allreduce
|
|
|
|
+ PETScErrorF ! is called in the CHKERRQ macro
|
|
|
|
|
|
|
|
contains
|
|
|
|
|
|
|
|
@@ -116,16 +115,11 @@ subroutine basicPETSc_init
|
|
|
|
character(len=1024) :: rankStr
|
|
|
|
|
|
|
|
external :: &
|
|
|
|
- SNESCreate, &
|
|
|
|
- SNESSetOptionsPrefix, &
|
|
|
|
- DMDACreate3D, &
|
|
|
|
- SNESSetDM, &
|
|
|
|
- DMCreateGlobalVector, &
|
|
|
|
- DMDASNESSetFunctionLocal, &
|
|
|
|
- SNESGetConvergedReason, &
|
|
|
|
+ SNESsetOptionsPrefix, &
|
|
|
|
SNESSetConvergenceTest, &
|
|
|
|
- SNESSetFromOptions
|
|
|
|
-
|
|
|
|
+ DMDAcreate3D, &
|
|
|
|
+ DMDASNESsetFunctionLocal
|
|
|
|
+
|
|
|
|
write(6,'(/,a)') ' <<<+- DAMASK_spectral_solverBasicPETSc init -+>>>'
|
|
|
|
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
|
|
|
|
#include "compilation_info.f90"
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -152,19 +146,20 @@ subroutine basicPETSc_init
|
2017-11-05 18:49:34 +05:30
|
|
|
grid(1),grid(2),localK, & ! local grid
|
|
|
|
da,ierr) ! handle, error
|
|
|
|
CHKERRQ(ierr)
|
|
|
|
- call SNESSetDM(snes,da,ierr); CHKERRQ(ierr)
|
|
|
|
- call DMCreateGlobalVector(da,solution_vec,ierr); CHKERRQ(ierr) ! global solution vector (grid x 9, i.e. every def grad tensor)
|
|
|
|
- call DMDASNESSetFunctionLocal(da,INSERT_VALUES,BasicPETSC_formResidual,PETSC_NULL_OBJECT,ierr) ! residual vector of same shape as solution vector
|
|
|
|
+ call SNESsetDM(snes,da,ierr); CHKERRQ(ierr)
|
2017-11-20 17:27:30 +05:30
|
|
|
+ call DMsetFromOptions(da,ierr); CHKERRQ(ierr)
|
|
|
|
+ call DMsetUp(da,ierr); CHKERRQ(ierr)
|
2017-11-05 18:49:34 +05:30
|
|
|
+ call DMcreateGlobalVector(da,solution_vec,ierr); CHKERRQ(ierr) ! global solution vector (grid x 9, i.e. every def grad tensor)
|
|
|
|
+ call DMDASNESsetFunctionLocal(da,INSERT_VALUES,BasicPETSC_formResidual,PETSC_NULL_SNES,ierr) ! residual vector of same shape as solution vector
|
|
|
|
CHKERRQ(ierr)
|
|
|
|
- call SNESSetDM(snes,da,ierr); CHKERRQ(ierr) ! connect snes to da
|
|
|
|
- call SNESSetConvergenceTest(snes,BasicPETSC_converged,PETSC_NULL_OBJECT,PETSC_NULL_FUNCTION,ierr) ! specify custom convergence check function "_converged"
|
|
|
|
+ call SNESsetDM(snes,da,ierr); CHKERRQ(ierr) ! connect snes to da
|
|
|
|
+ call SNESsetConvergenceTest(snes,BasicPETSC_converged,PETSC_NULL_SNES,PETSC_NULL_FUNCTION,ierr) ! specify custom convergence check function "_converged"
|
|
|
|
CHKERRQ(ierr)
|
|
|
|
- call SNESSetFromOptions(snes,ierr); CHKERRQ(ierr) ! pull it all together with additional cli arguments
|
|
|
|
+ call SNESsetFromOptions(snes,ierr); CHKERRQ(ierr) ! pull it all together with additional cli arguments
|
|
|
|
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
! init fields
|
2017-11-20 17:27:30 +05:30
|
|
|
call DMDAVecGetArrayF90(da,solution_vec,F,ierr); CHKERRQ(ierr) ! get the data out of PETSc to work with
|
|
|
|
-
|
|
|
|
restart: if (restartInc > 1_pInt) then
|
|
|
|
if (iand(debug_level(debug_spectral),debug_spectralRestart)/= 0) &
|
|
|
|
write(6,'(/,a,'//IO_intOut(restartInc-1_pInt)//',a)') &
|
|
|
|
@@ -253,8 +248,7 @@ type(tSolutionState) function &
|
2017-11-05 18:49:34 +05:30
|
|
|
SNESConvergedReason :: reason
|
|
|
|
|
|
|
|
external :: &
|
|
|
|
- SNESSolve, &
|
|
|
|
- SNESGetConvergedReason
|
|
|
|
+ SNESsolve
|
|
|
|
|
|
|
|
incInfo = incInfoIn
|
|
|
|
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -274,8 +268,7 @@ type(tSolutionState) function &
|
2017-11-05 18:49:34 +05:30
|
|
|
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
! solve BVP
|
|
|
|
- call SNESSolve(snes,PETSC_NULL_OBJECT,solution_vec,ierr)
|
2017-11-20 17:27:30 +05:30
|
|
|
- CHKERRQ(ierr)
|
|
|
|
+ call SNESsolve(snes,PETSC_NULL_VEC,solution_vec,ierr); CHKERRQ(ierr)
|
2017-11-05 18:49:34 +05:30
|
|
|
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
2017-11-20 17:27:30 +05:30
|
|
|
! check convergence
|
|
|
|
@@ -336,10 +329,6 @@ subroutine BasicPETSC_formResidual(in,x_scal,f_scal,dummy,ierr)
|
2017-11-05 18:49:34 +05:30
|
|
|
PetscObject :: dummy
|
|
|
|
PetscErrorCode :: ierr
|
|
|
|
|
|
|
|
- external :: &
|
|
|
|
- SNESGetNumberFunctionEvals, &
|
|
|
|
- SNESGetIterationNumber
|
|
|
|
-
|
|
|
|
call SNESGetNumberFunctionEvals(snes,nfuncs,ierr); CHKERRQ(ierr)
|
|
|
|
call SNESGetIterationNumber(snes,PETScIter,ierr); CHKERRQ(ierr)
|
|
|
|
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -555,11 +544,6 @@ subroutine BasicPETSc_destroy()
|
2017-11-05 18:49:34 +05:30
|
|
|
implicit none
|
|
|
|
PetscErrorCode :: ierr
|
|
|
|
|
|
|
|
- external :: &
|
|
|
|
- VecDestroy, &
|
|
|
|
- SNESDestroy, &
|
|
|
|
- DMDestroy
|
|
|
|
-
|
|
|
|
call VecDestroy(solution_vec,ierr); CHKERRQ(ierr)
|
|
|
|
call SNESDestroy(snes,ierr); CHKERRQ(ierr)
|
|
|
|
call DMDestroy(da,ierr); CHKERRQ(ierr)
|
|
|
|
diff --git a/src/spectral_mech_Polarisation.f90 b/src/spectral_mech_Polarisation.f90
|
2017-11-20 17:27:30 +05:30
|
|
|
index ecf707d4..3b024f56 100644
|
2017-11-05 18:49:34 +05:30
|
|
|
--- a/src/spectral_mech_Polarisation.f90
|
|
|
|
+++ b/src/spectral_mech_Polarisation.f90
|
|
|
|
@@ -5,6 +5,8 @@
|
|
|
|
!> @brief Polarisation scheme solver
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
module spectral_mech_Polarisation
|
|
|
|
+#include <petsc/finclude/petsc.h>
|
|
|
|
+ use PETSC
|
|
|
|
use prec, only: &
|
|
|
|
pInt, &
|
|
|
|
pReal
|
|
|
|
@@ -16,7 +18,6 @@ module spectral_mech_Polarisation
|
|
|
|
|
|
|
|
implicit none
|
|
|
|
private
|
|
|
|
-#include <petsc/finclude/petsc.h90>
|
|
|
|
|
|
|
|
character (len=*), parameter, public :: &
|
|
|
|
DAMASK_spectral_solverPolarisation_label = 'polarisation'
|
|
|
|
@@ -71,11 +72,9 @@ module spectral_mech_Polarisation
|
|
|
|
Polarisation_solution, &
|
|
|
|
Polarisation_forward, &
|
|
|
|
Polarisation_destroy
|
|
|
|
+
|
|
|
|
external :: &
|
|
|
|
- PETScFinalize, &
|
|
|
|
- MPI_Abort, &
|
|
|
|
- MPI_Bcast, &
|
|
|
|
- MPI_Allreduce
|
|
|
|
+ PETScErrorF ! is called in the CHKERRQ macro
|
|
|
|
|
|
|
|
contains
|
|
|
|
|
|
|
|
@@ -121,21 +120,17 @@ subroutine Polarisation_init
|
|
|
|
|
|
|
|
PetscErrorCode :: ierr
|
|
|
|
PetscScalar, pointer, dimension(:,:,:,:) :: xx_psc, F, F_tau
|
|
|
|
+
|
|
|
|
integer(pInt), dimension(:), allocatable :: localK
|
|
|
|
integer(pInt) :: proc
|
|
|
|
character(len=1024) :: rankStr
|
|
|
|
-
|
|
|
|
+
|
|
|
|
external :: &
|
|
|
|
- SNESCreate, &
|
|
|
|
- SNESSetOptionsPrefix, &
|
|
|
|
- DMDACreate3D, &
|
|
|
|
- SNESSetDM, &
|
|
|
|
- DMCreateGlobalVector, &
|
|
|
|
- DMDASNESSetFunctionLocal, &
|
|
|
|
- SNESGetConvergedReason, &
|
|
|
|
+ SNESsetOptionsPrefix, &
|
|
|
|
SNESSetConvergenceTest, &
|
|
|
|
- SNESSetFromOptions
|
|
|
|
-
|
|
|
|
+ DMDAcreate3D, &
|
|
|
|
+ DMDASNESsetFunctionLocal
|
|
|
|
+
|
|
|
|
write(6,'(/,a)') ' <<<+- DAMASK_spectral_solverPolarisation init -+>>>'
|
|
|
|
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
|
|
|
|
#include "compilation_info.f90"
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -164,13 +159,15 @@ subroutine Polarisation_init
|
2017-11-05 18:49:34 +05:30
|
|
|
grid(1),grid(2),localK, & ! local grid
|
|
|
|
da,ierr) ! handle, error
|
|
|
|
CHKERRQ(ierr)
|
|
|
|
- call SNESSetDM(snes,da,ierr); CHKERRQ(ierr)
|
|
|
|
- call DMCreateGlobalVector(da,solution_vec,ierr); CHKERRQ(ierr)
|
|
|
|
- call DMDASNESSetFunctionLocal(da,INSERT_VALUES,Polarisation_formResidual,PETSC_NULL_OBJECT,ierr)
|
|
|
|
+ call SNESsetDM(snes,da,ierr); CHKERRQ(ierr)
|
2017-11-20 17:27:30 +05:30
|
|
|
+ call DMsetFromOptions(da,ierr); CHKERRQ(ierr)
|
|
|
|
+ call DMsetUp(da,ierr); CHKERRQ(ierr)
|
2017-11-05 18:49:34 +05:30
|
|
|
+ call DMcreateGlobalVector(da,solution_vec,ierr); CHKERRQ(ierr)
|
|
|
|
+ call DMDASNESsetFunctionLocal(da,INSERT_VALUES,Polarisation_formResidual,PETSC_NULL_SNES,ierr)
|
|
|
|
CHKERRQ(ierr)
|
|
|
|
- call SNESSetConvergenceTest(snes,Polarisation_converged,PETSC_NULL_OBJECT,PETSC_NULL_FUNCTION,ierr)
|
|
|
|
+ call SNESsetConvergenceTest(snes,Polarisation_converged,PETSC_NULL_SNES,PETSC_NULL_FUNCTION,ierr)
|
|
|
|
CHKERRQ(ierr)
|
|
|
|
- call SNESSetFromOptions(snes,ierr); CHKERRQ(ierr)
|
|
|
|
+ call SNESsetFromOptions(snes,ierr); CHKERRQ(ierr)
|
|
|
|
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
! init fields
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -280,8 +277,7 @@ type(tSolutionState) function &
|
2017-11-05 18:49:34 +05:30
|
|
|
SNESConvergedReason :: reason
|
|
|
|
|
|
|
|
external :: &
|
|
|
|
- SNESSolve, &
|
|
|
|
- SNESGetConvergedReason
|
|
|
|
+ SNESsolve
|
|
|
|
|
|
|
|
incInfo = incInfoIn
|
|
|
|
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -304,8 +300,7 @@ type(tSolutionState) function &
|
2017-11-05 18:49:34 +05:30
|
|
|
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
! solve BVP
|
|
|
|
- call SNESSolve(snes,PETSC_NULL_OBJECT,solution_vec,ierr)
|
2017-11-20 17:27:30 +05:30
|
|
|
- CHKERRQ(ierr)
|
|
|
|
+ call SNESsolve(snes,PETSC_NULL_VEC,solution_vec,ierr); CHKERRQ(ierr)
|
2017-11-05 18:49:34 +05:30
|
|
|
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
2017-11-20 17:27:30 +05:30
|
|
|
! check convergence
|
|
|
|
@@ -383,10 +378,6 @@ subroutine Polarisation_formResidual(in,x_scal,f_scal,dummy,ierr)
|
2017-11-05 18:49:34 +05:30
|
|
|
integer(pInt) :: &
|
|
|
|
i, j, k, e
|
|
|
|
|
|
|
|
- external :: &
|
|
|
|
- SNESGetNumberFunctionEvals, &
|
|
|
|
- SNESGetIterationNumber
|
|
|
|
-
|
|
|
|
F => x_scal(1:3,1:3,1,&
|
|
|
|
XG_RANGE,YG_RANGE,ZG_RANGE)
|
|
|
|
F_tau => x_scal(1:3,1:3,2,&
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -698,11 +689,6 @@ subroutine Polarisation_destroy()
|
2017-11-05 18:49:34 +05:30
|
|
|
implicit none
|
|
|
|
PetscErrorCode :: ierr
|
|
|
|
|
|
|
|
- external :: &
|
|
|
|
- VecDestroy, &
|
|
|
|
- SNESDestroy, &
|
|
|
|
- DMDestroy
|
|
|
|
-
|
|
|
|
call VecDestroy(solution_vec,ierr); CHKERRQ(ierr)
|
|
|
|
call SNESDestroy(snes,ierr); CHKERRQ(ierr)
|
|
|
|
call DMDestroy(da,ierr); CHKERRQ(ierr)
|
|
|
|
diff --git a/src/spectral_thermal.f90 b/src/spectral_thermal.f90
|
2017-11-20 17:27:30 +05:30
|
|
|
index 322f1203..2374d83b 100644
|
2017-11-05 18:49:34 +05:30
|
|
|
--- a/src/spectral_thermal.f90
|
|
|
|
+++ b/src/spectral_thermal.f90
|
|
|
|
@@ -4,6 +4,8 @@
|
|
|
|
!> @brief Spectral solver for thermal conduction
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
module spectral_thermal
|
|
|
|
+#include <petsc/finclude/petsc.h>
|
|
|
|
+ use PETSC
|
|
|
|
use prec, only: &
|
|
|
|
pInt, &
|
|
|
|
pReal
|
|
|
|
@@ -18,7 +20,6 @@ module spectral_thermal
|
|
|
|
|
|
|
|
implicit none
|
|
|
|
private
|
|
|
|
-#include <petsc/finclude/petsc.h90>
|
|
|
|
|
|
|
|
character (len=*), parameter, public :: &
|
|
|
|
spectral_thermal_label = 'spectralthermal'
|
|
|
|
@@ -48,11 +49,9 @@ module spectral_thermal
|
|
|
|
spectral_thermal_solution, &
|
|
|
|
spectral_thermal_forward, &
|
|
|
|
spectral_thermal_destroy
|
|
|
|
+
|
|
|
|
external :: &
|
|
|
|
- PETScFinalize, &
|
|
|
|
- MPI_Abort, &
|
|
|
|
- MPI_Bcast, &
|
|
|
|
- MPI_Allreduce
|
|
|
|
+ PETScErrorF ! is called in the CHKERRQ macro
|
|
|
|
|
|
|
|
contains
|
|
|
|
|
|
|
|
@@ -84,28 +83,24 @@ subroutine spectral_thermal_init
|
|
|
|
thermalMapping
|
|
|
|
|
|
|
|
implicit none
|
|
|
|
- integer(pInt), dimension(:), allocatable :: localK
|
|
|
|
- integer(pInt) :: proc
|
|
|
|
integer(pInt) :: i, j, k, cell
|
|
|
|
DM :: thermal_grid
|
|
|
|
- PetscScalar, dimension(:,:,:), pointer :: x_scal
|
|
|
|
+
|
|
|
|
PetscErrorCode :: ierr
|
|
|
|
+ PetscScalar, dimension(:,:,:), pointer :: x_scal
|
|
|
|
+
|
|
|
|
+ integer(pInt), dimension(:), allocatable :: localK
|
|
|
|
+ integer(pInt) :: proc
|
|
|
|
|
|
|
|
external :: &
|
|
|
|
- SNESCreate, &
|
|
|
|
- SNESSetOptionsPrefix, &
|
|
|
|
- DMDACreate3D, &
|
|
|
|
- SNESSetDM, &
|
|
|
|
- DMDAGetCorners, &
|
|
|
|
- DMCreateGlobalVector, &
|
|
|
|
- DMDASNESSetFunctionLocal, &
|
|
|
|
- SNESSetFromOptions
|
|
|
|
-
|
|
|
|
- mainProcess: if (worldrank == 0_pInt) then
|
|
|
|
- write(6,'(/,a)') ' <<<+- spectral_thermal init -+>>>'
|
|
|
|
- write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
|
|
|
|
+ SNESsetOptionsPrefix, &
|
|
|
|
+ DMDAcreate3D, &
|
|
|
|
+ DMDAgetCorners, &
|
|
|
|
+ DMDASNESsetFunctionLocal
|
|
|
|
+
|
|
|
|
+ write(6,'(/,a)') ' <<<+- spectral_thermal init -+>>>'
|
|
|
|
+ write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
|
|
|
|
#include "compilation_info.f90"
|
|
|
|
- endif mainProcess
|
|
|
|
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
! initialize solver specific parts of PETSc
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -124,16 +119,18 @@ subroutine spectral_thermal_init
|
|
|
|
grid (1),grid(2),localK, & ! local grid
|
|
|
|
thermal_grid,ierr) ! handle, error
|
|
|
|
CHKERRQ(ierr)
|
|
|
|
- call SNESSetDM(thermal_snes,thermal_grid,ierr); CHKERRQ(ierr) ! connect snes to da
|
|
|
|
- call DMCreateGlobalVector(thermal_grid,solution ,ierr); CHKERRQ(ierr) ! global solution vector (grid x 1, i.e. every def grad tensor)
|
|
|
|
- call DMDASNESSetFunctionLocal(thermal_grid,INSERT_VALUES,spectral_thermal_formResidual,&
|
2017-11-05 18:49:34 +05:30
|
|
|
- PETSC_NULL_OBJECT,ierr) ! residual vector of same shape as solution vector
|
2017-11-20 17:27:30 +05:30
|
|
|
+ call SNESsetDM(thermal_snes,thermal_grid,ierr); CHKERRQ(ierr) ! connect snes to da
|
|
|
|
+ call DMsetFromOptions(thermal_grid,ierr); CHKERRQ(ierr)
|
|
|
|
+ call DMsetUp(thermal_grid,ierr); CHKERRQ(ierr)
|
|
|
|
+ call DMcreateGlobalVector(thermal_grid,solution,ierr); CHKERRQ(ierr) ! global solution vector (grid x 1, i.e. every def grad tensor)
|
|
|
|
+ call DMDASNESsetFunctionLocal(thermal_grid,INSERT_VALUES,spectral_thermal_formResidual,&
|
2017-11-05 18:49:34 +05:30
|
|
|
+ PETSC_NULL_SNES,ierr) ! residual vector of same shape as solution vector
|
|
|
|
CHKERRQ(ierr)
|
2017-11-20 17:27:30 +05:30
|
|
|
- call SNESSetFromOptions(thermal_snes,ierr); CHKERRQ(ierr) ! pull it all together with additional cli arguments
|
|
|
|
+ call SNESsetFromOptions(thermal_snes,ierr); CHKERRQ(ierr) ! pull it all together with additional cli arguments
|
2017-11-05 18:49:34 +05:30
|
|
|
|
2017-11-20 17:27:30 +05:30
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
! init fields
|
|
|
|
- call DMDAGetCorners(thermal_grid,xstart,ystart,zstart,xend,yend,zend,ierr)
|
|
|
|
+ call DMDAgetCorners(thermal_grid,xstart,ystart,zstart,xend,yend,zend,ierr)
|
|
|
|
CHKERRQ(ierr)
|
|
|
|
xend = xstart + xend - 1
|
|
|
|
yend = ystart + yend - 1
|
|
|
|
@@ -149,9 +146,9 @@ subroutine spectral_thermal_init
|
|
|
|
temperature_lastInc(i,j,k) = temperature_current(i,j,k)
|
|
|
|
temperature_stagInc(i,j,k) = temperature_current(i,j,k)
|
|
|
|
enddo; enddo; enddo
|
|
|
|
- call DMDAVecGetArrayF90(thermal_grid,solution,x_scal,ierr); CHKERRQ(ierr) !< get the data out of PETSc to work with
|
|
|
|
+ call DMDAvecGetArrayF90(thermal_grid,solution,x_scal,ierr); CHKERRQ(ierr) !< get the data out of PETSc to work with
|
|
|
|
x_scal(xstart:xend,ystart:yend,zstart:zend) = temperature_current
|
|
|
|
- call DMDAVecRestoreArrayF90(thermal_grid,solution,x_scal,ierr); CHKERRQ(ierr)
|
|
|
|
+ call DMDAvecRestoreArrayF90(thermal_grid,solution,x_scal,ierr); CHKERRQ(ierr)
|
|
|
|
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
! thermal reference diffusion update
|
|
|
|
@@ -205,8 +202,8 @@ type(tSolutionState) function spectral_thermal_solution(timeinc,timeinc_old,load
|
|
|
|
external :: &
|
|
|
|
VecMin, &
|
|
|
|
VecMax, &
|
|
|
|
- SNESSolve, &
|
|
|
|
- SNESGetConvergedReason
|
|
|
|
+ SNESsolve, &
|
|
|
|
+ SNESgetConvergedReason
|
|
|
|
|
|
|
|
spectral_thermal_solution%converged =.false.
|
|
|
|
|
|
|
|
@@ -215,7 +212,7 @@ type(tSolutionState) function spectral_thermal_solution(timeinc,timeinc_old,load
|
2017-11-05 18:49:34 +05:30
|
|
|
params%timeinc = timeinc
|
|
|
|
params%timeincOld = timeinc_old
|
|
|
|
|
|
|
|
- call SNESSolve(thermal_snes,PETSC_NULL_OBJECT,solution,ierr); CHKERRQ(ierr)
|
2017-11-20 17:27:30 +05:30
|
|
|
+ call SNESsolve(thermal_snes,PETSC_NULL_VEC,solution,ierr); CHKERRQ(ierr)
|
2017-11-05 18:49:34 +05:30
|
|
|
call SNESGetConvergedReason(thermal_snes,reason,ierr); CHKERRQ(ierr)
|
|
|
|
|
|
|
|
if (reason < 1) then
|
2017-11-20 17:27:30 +05:30
|
|
|
@@ -245,14 +242,12 @@ type(tSolutionState) function spectral_thermal_solution(timeinc,timeinc_old,load
|
2017-11-05 18:49:34 +05:30
|
|
|
|
|
|
|
call VecMin(solution,position,minTemperature,ierr); CHKERRQ(ierr)
|
|
|
|
call VecMax(solution,position,maxTemperature,ierr); CHKERRQ(ierr)
|
|
|
|
- if (worldrank == 0) then
|
|
|
|
- if (spectral_thermal_solution%converged) &
|
|
|
|
- write(6,'(/,a)') ' ... thermal conduction converged ..................................'
|
|
|
|
- write(6,'(/,a,f8.4,2x,f8.4,2x,f8.4,/)',advance='no') ' Minimum|Maximum|Delta Temperature / K = ',&
|
|
|
|
- minTemperature, maxTemperature, stagNorm
|
|
|
|
- write(6,'(/,a)') ' ==========================================================================='
|
|
|
|
- flush(6)
|
|
|
|
- endif
|
|
|
|
+ if (spectral_thermal_solution%converged) &
|
|
|
|
+ write(6,'(/,a)') ' ... thermal conduction converged ..................................'
|
|
|
|
+ write(6,'(/,a,f8.4,2x,f8.4,2x,f8.4,/)',advance='no') ' Minimum|Maximum|Delta Temperature / K = ',&
|
|
|
|
+ minTemperature, maxTemperature, stagNorm
|
|
|
|
+ write(6,'(/,a)') ' ==========================================================================='
|
|
|
|
+ flush(6)
|
|
|
|
|
|
|
|
end function spectral_thermal_solution
|
|
|
|
|
|
|
|
diff --git a/src/spectral_utilities.f90 b/src/spectral_utilities.f90
|
2017-11-20 17:27:30 +05:30
|
|
|
index 1bbf2e60..52bb07fd 100644
|
2017-11-05 18:49:34 +05:30
|
|
|
--- a/src/spectral_utilities.f90
|
|
|
|
+++ b/src/spectral_utilities.f90
|
|
|
|
@@ -5,15 +5,16 @@
|
|
|
|
!--------------------------------------------------------------------------------------------------
|
|
|
|
module spectral_utilities
|
|
|
|
use, intrinsic :: iso_c_binding
|
|
|
|
+#include <petsc/finclude/petscsys.h>
|
|
|
|
+ use PETScSys
|
|
|
|
use prec, only: &
|
|
|
|
pReal, &
|
|
|
|
pInt
|
|
|
|
use math, only: &
|
|
|
|
math_I3
|
|
|
|
-
|
|
|
|
+
|
|
|
|
implicit none
|
|
|
|
private
|
|
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-#include <petsc/finclude/petscsys.h>
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include 'fftw3-mpi.f03'
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logical, public :: cutBack =.false. !< cut back of BVP solver in case convergence is not achieved or a material point is terminally ill
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@@ -148,6 +149,8 @@ module spectral_utilities
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FIELD_DAMAGE_ID
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private :: &
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utilities_getFreqDerivative
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+ external :: &
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+ PETScErrorF ! is called in the CHKERRQ macro
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contains
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@@ -196,12 +199,6 @@ subroutine utilities_init()
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geomSize
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implicit none
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-
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- external :: &
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- PETScOptionsClear, &
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- PETScOptionsInsertString, &
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- MPI_Abort
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-
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PetscErrorCode :: ierr
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integer(pInt) :: i, j, k
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integer(pInt), dimension(3) :: k_s
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@@ -215,6 +212,8 @@ subroutine utilities_init()
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scalarSize = 1_C_INTPTR_T, &
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vecSize = 3_C_INTPTR_T, &
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tensorSize = 9_C_INTPTR_T
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+ external :: &
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+ PetscOptionsInsertString
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write(6,'(/,a)') ' <<<+- spectral_utilities init -+>>>'
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write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
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@@ -231,13 +230,13 @@ subroutine utilities_init()
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trim(PETScDebug), &
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' add more using the PETSc_Options keyword in numerics.config '; flush(6)
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- call PetscOptionsClear(PETSC_NULL_OBJECT,ierr)
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+ call PETScOptionsClear(PETSC_NULL_OPTIONS,ierr)
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CHKERRQ(ierr)
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- if(debugPETSc) call PetscOptionsInsertString(PETSC_NULL_OBJECT,trim(PETSCDEBUG),ierr)
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+ if(debugPETSc) call PETScOptionsInsertString(PETSC_NULL_OPTIONS,trim(PETSCDEBUG),ierr)
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CHKERRQ(ierr)
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- call PetscOptionsInsertString(PETSC_NULL_OBJECT,trim(petsc_defaultOptions),ierr)
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+ call PETScOptionsInsertString(PETSC_NULL_OPTIONS,trim(petsc_defaultOptions),ierr)
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CHKERRQ(ierr)
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- call PetscOptionsInsertString(PETSC_NULL_OBJECT,trim(petsc_options),ierr)
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+ call PETScOptionsInsertString(PETSC_NULL_OPTIONS,trim(petsc_options),ierr)
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CHKERRQ(ierr)
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grid1Red = grid(1)/2_pInt + 1_pInt
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@@ -632,9 +631,6 @@ real(pReal) function utilities_divergenceRMS()
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integer(pInt) :: i, j, k, ierr
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complex(pReal), dimension(3) :: rescaledGeom
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- external :: &
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- MPI_Allreduce
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-
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write(6,'(/,a)') ' ... calculating divergence ................................................'
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flush(6)
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@@ -686,9 +682,6 @@ real(pReal) function utilities_curlRMS()
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complex(pReal), dimension(3,3) :: curl_fourier
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complex(pReal), dimension(3) :: rescaledGeom
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- external :: &
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- MPI_Allreduce
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-
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write(6,'(/,a)') ' ... calculating curl ......................................................'
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flush(6)
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2017-11-20 17:27:30 +05:30
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@@ -1099,9 +1092,6 @@ function utilities_forwardField(timeinc,field_lastInc,rate,aim)
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2017-11-05 18:49:34 +05:30
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real(pReal), dimension(3,3) :: fieldDiff !< <a + adot*t> - aim
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PetscErrorCode :: ierr
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- external :: &
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- MPI_Allreduce
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-
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utilities_forwardField = field_lastInc + rate*timeinc
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if (present(aim)) then !< correct to match average
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fieldDiff = sum(sum(sum(utilities_forwardField,dim=5),dim=4),dim=3)*wgt
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2017-11-20 17:27:30 +05:30
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@@ -1193,8 +1183,6 @@ subroutine utilities_updateIPcoords(F)
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2017-11-05 18:49:34 +05:30
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integer(pInt) :: i, j, k, m, ierr
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real(pReal), dimension(3) :: step, offset_coords
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real(pReal), dimension(3,3) :: Favg
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- external &
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- MPI_Bcast
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!--------------------------------------------------------------------------------------------------
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! integration in Fourier space
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--
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2.15.0
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